Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p37280 Brassica napus HOM05D005583 ORTHO05D006507 3.3e-232 808.1 446 100.0
BolC7t44234H Brassica oleracea HOM05D005583 ORTHO05D006507 3.9e-201 704.9 401 99.5
BcaC06g33760 Brassica carinata HOM05D005583 ORTHO05D006507 5.1e-201 704.5 400 99.8
A06p40700 Brassica napus HOM05D005583 ORTHO05D006507 1.4e-182 643.3 401 93.0
BraA06t26991Z Brassica rapa HOM05D005583 ORTHO05D006507 4.5e-181 638.3 402 92.8
BcaC06g30938 Brassica carinata HOM05D005583 ORTHO05D006507 6.1e-154 548.1 402 83.1
Sp2g17030 Schrenkiella parvula HOM05D005583 ORTHO05D006507 3.8e-127 459.1 403 73.7
Thhalv10003517m.g Eutrema salsugineum HOM05D005583 ORTHO05D006507 6.4e-119 431.8 407 69.3
AL5G17540 Arabidopsis lyrata HOM05D005583 ORTHO05D006507 1.5e-107 394.0 405 66.9
CARHR149650 Cardamine hirsuta HOM05D005583 ORTHO05D006507 1.1e-105 387.9 419 65.4
Carub.0005s0655 Capsella rubella HOM05D005583 ORTHO05D006507 1.0e-103 381.3 406 66.0
Aa31LG2G4780 Aethionema arabicum HOM05D005583 ORTHO05D006507 9.3e-102 374.8 411 63.5
AT3G28030 Arabidopsis thaliana HOM05D005583 ORTHO05D006507 8.2e-98 361.7 403 62.8
THA.LOC104825294 Tarenaya hassleriana HOM05D005583 ORTHO05D006507 5.3e-81 305.8 452 49.6
C07p37240 Brassica napus HOM05D005583 ORTHO05D006507 1.3e-71 274.6 142 95.1
CSS0039879 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 5.5e-54 216.1 349 42.4
Duzib147G0322 Durio zibethinus HOM05D005583 ORTHO05D006507 3.6e-53 213.4 347 45.2
Gohir.D07G225712 Gossypium hirsutum HOM05D005583 ORTHO05D006507 1.8e-52 211.1 345 42.0
Hma1.2p1_0697F.1_g204850 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 1.8e-52 211.1 365 47.4
Hma1.2p1_0697F.1_g204860 Hydrangea macrophylla HOM05D005583 ORTHO05D006507 1.8e-52 211.1 365 47.4
Actinidia36072 Actinidia chinensis HOM05D005583 ORTHO05D006507 1.5e-51 208.0 347 42.9
Gohir.A07G218700 Gossypium hirsutum HOM05D005583 ORTHO05D006507 2.6e-51 207.2 158 65.2
Gorai.001G260400 Gossypium raimondii HOM05D005583 ORTHO05D006507 5.7e-51 206.1 362 40.9
Atru.chr6.2177 Acer truncatum HOM05D005583 ORTHO05D006507 2.2e-50 204.1 497 37.6
CSS0006408 Camellia sinensis var. sinensis HOM05D005583 ORTHO05D006507 2.8e-50 203.8 373 39.4
CiPaw.04G023600 Carya illinoinensis HOM05D005583 ORTHO05D006507 2.8e-50 203.8 361 44.0
COL.COLO4_04368 Corchorus olitorius HOM05D005583 ORTHO05D006507 6.3e-50 202.6 349 42.1
Ciclev10014025m.g Citrus clementina HOM05D005583 ORTHO05D006507 8.3e-50 202.2 347 41.8
Dinv35039 Davidia involucrata HOM05D005583 ORTHO05D006507 1.8e-49 201.1 347 40.6
TPR.G30816 Trifolium pratense HOM05D005583 ORTHO05D006507 1.8e-49 201.1 483 34.0
Cpa.g.sc140.34 Carica papaya HOM05D005583 ORTHO05D006507 2.4e-49 200.7 162 64.2
MBI15_g24176_MAGBIO Magnolia biondii HOM05D005583 ORTHO05D006507 2.4e-49 200.7 456 36.0
SGA_v2.0_scaffold135G34849 Striga asiatica HOM05D005583 ORTHO05D006507 3.1e-49 200.3 444 36.0
MSTRG.3182 Avicennia marina HOM05D005583 ORTHO05D006507 5.4e-49 199.5 457 37.2
HanXRQChr14g0450181 Helianthus annuus HOM05D005583 ORTHO05D006507 5.4e-49 199.5 412 37.9
VMungo1383G3393 Vigna mungo HOM05D005583 ORTHO05D006507 5.4e-49 199.5 484 36.0
PGR142G3038 Punica granatum HOM05D005583 ORTHO05D006507 9.1e-49 198.7 456 35.1
QL02p077165 Quercus lobata HOM05D005583 ORTHO05D006507 9.1e-49 198.7 505 34.5
Manes.15G181100 Manihot esculenta HOM05D005583 ORTHO05D006507 1.6e-48 198.0 487 39.2
Solyc02g067670.4 Solanum lycopersicum HOM05D005583 ORTHO05D006507 2.7e-48 197.2 385 38.2
Sc06g0001630 Simmondsia chinensis HOM05D005583 ORTHO05D006507 4.5e-48 196.4 447 37.6
Nn4g22860 Nelumbo nucifera HOM05D005583 ORTHO05D006507 1.0e-47 195.3 345 40.6
PSO832G0708 Papaver somniferum HOM05D005583 ORTHO05D006507 1.0e-47 195.3 150 66.7
Glyma.01G077200 Glycine max HOM05D005583 ORTHO05D006507 1.3e-47 194.9 410 39.5
Aqoxy3G03052 Aquilegia oxysepala HOM05D005583 ORTHO05D006507 1.7e-47 194.5 353 40.2
RcHm_v2.0_Chr2g0170851 Rosa chinensis HOM05D005583 ORTHO05D006507 1.7e-47 194.5 362 44.8
SalBow1G3935 Salvia bowleyana HOM05D005583 ORTHO05D006507 1.7e-47 194.5 445 41.1
CANSAT64G0115 Cannabis sativa HOM05D005583 ORTHO05D006507 6.6e-47 192.6 464 35.1
Cfa007452 Carpinus fangiana HOM05D005583 ORTHO05D006507 6.6e-47 192.6 432 35.2
Cc07_g02460 Coffea canephora HOM05D005583 ORTHO05D006507 6.6e-47 192.6 166 59.6
Eucgr.I01829 Eucalyptus grandis HOM05D005583 ORTHO05D006507 1.1e-46 191.8 368 40.5
PGSC0003DMG400006911 Solanum tuberosum HOM05D005583 ORTHO05D006507 1.1e-46 191.8 397 37.8
Haze_14649 Corylus avellana HOM05D005583 ORTHO05D006507 1.5e-46 191.4 354 37.6
FvH4_6g50430 Fragaria vesca HOM05D005583 ORTHO05D006507 1.9e-46 191.0 337 41.5
Lalb_Chr10g0093441 Lupinus albus HOM05D005583 ORTHO05D006507 7.2e-46 189.1 482 34.0
FAN14G4719 Fragaria x ananassa HOM05D005583 ORTHO05D006507 9.5e-46 188.7 337 41.2
Peaxi162Scf00368g00115 Petunia axillaris HOM05D005583 ORTHO05D006507 1.6e-45 188.0 381 37.3
Medtr7g034405 Medicago truncatula HOM05D005583 ORTHO05D006507 2.1e-45 187.6 491 35.2
Prupe.3G281300 Prunus persica HOM05D005583 ORTHO05D006507 2.1e-45 187.6 350 39.4
Lj7A589G58 Lonicera japonica HOM05D005583 ORTHO05D006507 2.8e-45 187.2 372 37.6
TAR629G0978 Trochodendron aralioides HOM05D005583 ORTHO05D006507 2.8e-45 187.2 367 39.0
PSO063G3250 Papaver somniferum HOM05D005583 ORTHO05D006507 3.6e-45 186.8 446 38.8
Sopen02g016780 Solanum pennellii HOM05D005583 ORTHO05D006507 3.6e-45 186.8 387 37.2
Migut.H00145 Erythranthe guttata HOM05D005583 ORTHO05D006507 8.0e-45 185.7 117 73.5
FAN09G0355 Fragaria x ananassa HOM05D005583 ORTHO05D006507 1.0e-44 185.3 116 75.0
MD17G1038000 Malus domestica HOM05D005583 ORTHO05D006507 1.4e-44 184.9 358 44.1
ECA238G4583 Erigeron canadensis HOM05D005583 ORTHO05D006507 3.0e-44 183.7 420 38.8
Potri.017G070500 Populus trichocarpa HOM05D005583 ORTHO05D006507 3.0e-44 183.7 345 42.9
arahy.Tifrunner.gnm1.ann1.YT8U7M Arachis hypogaea HOM05D005583 ORTHO05D006507 5.2e-44 183.0 420 38.6
Lsat_1_v5_gn_2_92580 Lactuca sativa HOM05D005583 ORTHO05D006507 5.2e-44 183.0 346 43.4
CAN.G983.2 Capsicum annuum HOM05D005583 ORTHO05D006507 6.8e-44 182.6 293 42.3
arahy.Tifrunner.gnm1.ann1.8IP107 Arachis hypogaea HOM05D005583 ORTHO05D006507 8.9e-44 182.2 402 36.6
Ca_14482_v3 Cicer arietinum L. HOM05D005583 ORTHO05D006507 8.9e-44 182.2 479 35.7
Lj1g0019005 Lotus japonicus HOM05D005583 ORTHO05D006507 8.9e-44 182.2 514 35.0
GSVIVG01032508001 Vitis vinifera HOM05D005583 ORTHO05D006507 8.9e-44 182.2 443 36.3
Nitab4.5_0001727g0030 Nicotiana tabacum HOM05D005583 ORTHO05D006507 1.2e-43 181.8 412 33.5
Psat3g171760 Pisum sativum HOM05D005583 ORTHO05D006507 1.2e-43 181.8 458 37.8
MELO3C009939.2 Cucumis melo HOM05D005583 ORTHO05D006507 1.5e-43 181.4 342 39.8
CDE10G1103 Ceratophyllum demersum HOM05D005583 ORTHO05D006507 3.4e-43 180.3 400 34.2
ClCG10G014410 Citrullus lanatus HOM05D005583 ORTHO05D006507 3.4e-43 180.3 354 41.2
Zm00001eb007570 Zea mays HOM05D005583 ORTHO05D006507 3.4e-43 180.3 149 60.4
TWI56G1339 Tripterygium wilfordii HOM05D005583 ORTHO05D006507 4.4e-43 179.9 372 37.6
SEGI_39705 Sequoiadendron giganteum HOM05D005583 ORTHO05D006507 5.7e-43 179.5 157 56.1
Os03g0205400 Oryza sativa ssp. japonica HOM05D005583 ORTHO05D006507 3.7e-42 176.8 191 50.8
CsaV3_3G042180 Cucumis sativus L. HOM05D005583 ORTHO05D006507 8.3e-42 175.6 378 36.2
EL10Ac1g00599 Beta vulgaris HOM05D005583 ORTHO05D006507 1.4e-41 174.9 327 40.4
Sed0016811 Sechium edule HOM05D005583 ORTHO05D006507 1.8e-41 174.5 352 42.6
Hund12473 Selenicereus undatus HOM05D005583 ORTHO05D006507 1.8e-41 174.5 350 39.4
Nitab4.5_0001709g0090 Nicotiana tabacum HOM05D005583 ORTHO05D006507 2.4e-41 174.1 394 33.8
unitig_21.g20499 Utricularia gibba HOM05D005583 ORTHO05D006507 5.4e-41 172.9 330 40.0
Sabra17G0050500 Salix brachista HOM05D005583 ORTHO05D006507 7.0e-41 172.6 346 37.9
ATR0629G036 Amborella trichopoda HOM05D005583 ORTHO05D006507 4.6e-40 169.9 344 39.5
Rhsim10G0025300 Rhododendron simsii HOM05D005583 ORTHO05D006507 4.6e-40 169.9 174 54.0
AagrBONN_evm.TU.Sc2ySwM_228.1548 Anthoceros agrestis HOM05D005583 ORTHO05D006507 1.5e-38 164.9 115 66.1
DCAR_011222 Daucus carota HOM05D005583 ORTHO05D006507 7.3e-38 162.5 353 36.5
Mapoly0177s0011 Marchantia polymorpha HOM05D005583 ORTHO05D006507 1.4e-36 158.3 151 53.6
AUR62035940 Chenopodium quinoa HOM05D005583 ORTHO05D006507 1.2e-35 155.2 346 37.9
CBR_g74695 Chara braunii HOM05D005583 ORTHO05D006507 9.8e-35 152.1 120 59.2
Pp3c11_24040 Physcomitrium patens HOM05D005583 ORTHO05D006507 8.3e-34 149.1 463 32.6
Cre10.g429050 Chlamydomonas reinhardtii HOM05D005583 ORTHO05D006507 3.6e-29 133.7 131 50.4
Ah.10g033560 Amaranthus hybridus HOM05D005583 ORTHO05D006507 2.3e-28 131.0 357 33.9
PGR142G0990 Punica granatum HOM05D005583 ORTHO05D006507 1.6e-24 118.2 78 69.2
vmacro05807 Vaccinium macrocarpon HOM05D005583 ORTHO05D006507 1.0e-23 115.5 375 32.0
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 5.1e-15 86.7 50 74.0
MCO01G030 Micromonas commoda HOM05D005583 ORTHO05D006507 2.5e-14 84.3 105 41.9
PRCOL_00006730 Prasinoderma coloniale HOM05D005583 ORTHO05D006507 6.4e-10 69.7 108 36.1
Duzib264G0905 Durio zibethinus HOM05D005583 ORTHO05D006507 5.1e-07 60.1 87 43.7
Cfa026862 Carpinus fangiana HOM05D005583 ORTHO05D006507 1.5e-06 58.5 165 27.9
MELO3C028469.2 Cucumis melo HOM05D005583 ORTHO05D044829 7.3e-06 56.2 50 54.0


User provided reference genes

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