Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p03660 Brassica napus HOM05D000422 ORTHO05D023999 1.1e-50 203.0 105 100.0
BcaB01g00774 Brassica carinata HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BcaB05g22981 Brassica carinata HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BcaC07g39362 Brassica carinata HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BcaC09g49911 Brassica carinata HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
A01p25180 Brassica napus HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
A06p18880 Brassica napus HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
C01p31380 Brassica napus HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BolC1t03075H Brassica oleracea HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BolC8t50010H Brassica oleracea HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BraA01t02426Z Brassica rapa HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
BraA06t24971Z Brassica rapa HOM05D000422 ORTHO05D001248 2.0e-07 59.3 30 100.0
Thhalv10010105m.g Eutrema salsugineum HOM05D000422 ORTHO05D001248 4.5e-07 58.2 30 96.7
C08p23840 Brassica napus HOM05D000422 ORTHO05D001248 5.9e-07 57.8 30 96.7
Sp5g13180 Schrenkiella parvula HOM05D000422 ORTHO05D001248 7.7e-07 57.4 30 96.7
CDE09G0897 Ceratophyllum demersum HOM05D000422 ORTHO05D001248 1.3e-06 56.6 30 93.3
CBR_g8305 Chara braunii HOM05D000422 ORTHO05D001248 1.3e-06 56.6 30 93.3
HanXRQChr09g0273921 Helianthus annuus HOM05D000422 ORTHO05D001248 1.7e-06 56.2 30 93.3
Manes.14G045700 Manihot esculenta HOM05D000422 ORTHO05D001248 1.7e-06 56.2 30 93.3
Atru.chr6.1902 Acer truncatum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Aa31LG3G7410 Aethionema arabicum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Ah.02g114650 Amaranthus hybridus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Ah.11g046770 Amaranthus hybridus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AL5G28380 Arabidopsis lyrata HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AL8G25110 Arabidopsis lyrata HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AT3G48870 Arabidopsis thaliana HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AT5G50920 Arabidopsis thaliana HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
MSTRG.4638 Avicennia marina HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
MSTRG.9368 Avicennia marina HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
EL10Ac5g11304 Beta vulgaris HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
A03p16460 Brassica napus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
C03p19350 Brassica napus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
BolC3t14321H Brassica oleracea HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
BraA03t10935Z Brassica rapa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CANSAT56G1478 Cannabis sativa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Carub.0005s1504 Capsella rubella HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Carub.0008s1093 Capsella rubella HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CAN.G521.1 Capsicum annuum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Cpa.g.sc1024.2 Carica papaya HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CiPaw.11G001300 Carya illinoinensis HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CiPaw.12G001600 Carya illinoinensis HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CDE02G0465 Ceratophyllum demersum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CDE02G2810 Ceratophyllum demersum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CDE06G0243 Ceratophyllum demersum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AUR62009520 Chenopodium quinoa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
AUR62034768 Chenopodium quinoa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Cc04_g05910 Coffea canephora HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
COL.COLO4_37236 Corchorus olitorius HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
MELO3C026162.2 Cucumis melo HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
CsaV3_1G000100 Cucumis sativus L. HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Dinv13735 Davidia involucrata HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Dinv23211 Davidia involucrata HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Duzib205G0028 Durio zibethinus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Thhalv10012603m.g Eutrema salsugineum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
FvH4_5g09290 Fragaria vesca HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
FAN18G4242 Fragaria x ananassa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gohir.A03G056700 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gohir.A07G047400 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gohir.D03G109800 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gohir.D07G051600 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gorai.001G054700 Gossypium raimondii HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Gorai.003G116200 Gossypium raimondii HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Hma1.2p1_1070F.1_g254130 Hydrangea macrophylla HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Hma1.2p1_1171F.1_g263510 Hydrangea macrophylla HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
MD06G1132300 Malus domestica HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
MD14G1148700 Malus domestica HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Manes.06G125800 Manihot esculenta HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Mapoly0113s0004 Marchantia polymorpha HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Nn4g22167 Nelumbo nucifera HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Nitab4.5_0000663g0180 Nicotiana tabacum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Oeu013654.1 Olea europaea HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Oeu013655.1 Olea europaea HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Oeu061251.2 Olea europaea HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
PSO017G2230 Papaver somniferum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
PSO478G5088 Papaver somniferum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Peaxi162Scf00314g00528 Petunia axillaris HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Peaxi162Scf01168g00111 Petunia axillaris HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Pp3c16_17640 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Pp3c25_7180 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Pp3c3_18360 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Pp3c5_23010 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Pp3c6_7360 Physcomitrium patens HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Potri.012G105900 Populus trichocarpa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Potri.015G105100 Populus trichocarpa HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Prupe.5G143300 Prunus persica HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Sabra12G0078200 Salix brachista HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Sp6g13090 Schrenkiella parvula HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Hund02499 Selenicereus undatus HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Sc04g0000250 Simmondsia chinensis HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Sc22g0003500 Simmondsia chinensis HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Solyc12g042060.3 Solanum lycopersicum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Sopen12g021150 Solanum pennellii HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
PGSC0003DMG400014248 Solanum tuberosum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
PGSC0003DMG401014476 Solanum tuberosum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
PGSC0003DMG402014476 Solanum tuberosum HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
SGA_v2.0_scaffold40G15621 Striga asiatica HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
THA.LOC104798922 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
THA.LOC104811561 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
THA.LOC104825035 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Thecc.03G138700 Theobroma cacao HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
TWI23G0413 Tripterygium wilfordii HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
TWI39G0664 Tripterygium wilfordii HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
TAR371G0742 Trochodendron aralioides HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
TAR622G0976 Trochodendron aralioides HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
TAR629G2448 Trochodendron aralioides HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
GSVIVG01008636001 Vitis vinifera HOM05D000422 ORTHO05D001248 2.3e-06 55.8 30 93.3
Eucgr.K02198 Eucalyptus grandis HOM05D000422 ORTHO05D001248 3.8e-06 55.1 30 90.0
Aqoxy3G01886 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Aqoxy5G03174 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Aqoxy5G03194 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
BcaC06g35345 Brassica carinata HOM05D000422 ORTHO05D023999 5.0e-06 54.7 30 93.3
CSS0021948 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
CARHR157680 Cardamine hirsuta HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Ca_10884_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Ca_17585_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
ClCG03G001710 Citrullus lanatus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
MELO3C020666.2 Cucumis melo HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
CsaV3_1G033930 Cucumis sativus L. HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
DCAR_016352 Daucus carota HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
ECA247G2359 Erigeron canadensis HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
ECA247G2390 Erigeron canadensis HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Glyma.04G200400 Glycine max HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Glyma.06G165200 Glycine max HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
HanXRQChr05g0154561 Helianthus annuus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
HanXRQChr08g0235061 Helianthus annuus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
HanXRQChr16g0498881 Helianthus annuus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lsat_1_v5_gn_4_84680 Lactuca sativa HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lsat_1_v5_gn_5_15861 Lactuca sativa HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lj9C485G16 Lonicera japonica HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lj1g0019828 Lotus japonicus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lalb_Chr07g0183761 Lupinus albus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lalb_Chr11g0069261 Lupinus albus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lalb_Chr12g0202441 Lupinus albus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lalb_Chr13g0297011 Lupinus albus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Lalb_Chr23g0272901 Lupinus albus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Medtr3g102830 Medicago truncatula HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Medtr3g498725 Medicago truncatula HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
PSO017G4374 Papaver somniferum HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
PSO478G3114 Papaver somniferum HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Phvul.009G162100 Phaseolus vulgaris HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Psat5g054560 Pisum sativum HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
QL10p000886 Quercus lobata HOM05D000422 ORTHO05D001248 5.0e-06 54.7 44 68.2
Sed0011803 Sechium edule HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Sed0016051 Sechium edule HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Hund10055 Selenicereus undatus HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Solyc03g118340.3 Solanum lycopersicum HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
Sopen03g037240 Solanum pennellii HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
TPR.G21580 Trifolium pratense HOM05D000422 ORTHO05D001248 5.0e-06 54.7 30 90.0
AagrBONN_evm.TU.Sc2ySwM_344.2914 Anthoceros agrestis HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
CSS0009915 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
CSS0044818 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
CARHR257340 Cardamine hirsuta HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
Duzib068G0301 Durio zibethinus HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
ECA232G2662 Erigeron canadensis HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
Migut.D01192 Erythranthe guttata HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
PGR004G1503 Punica granatum HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
PGR044G1784 Punica granatum HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
Rhsim08G0196000 Rhododendron simsii HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
SMO353G0292 Selaginella moellendorffii HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
vmacro19168 Vaccinium macrocarpon HOM05D000422 ORTHO05D001248 6.6e-06 54.3 30 90.0
Lj1g0007052 Lotus japonicus HOM05D000422 ORTHO05D001248 8.6e-06 53.9 48 62.5
Oeu017192.1 Olea europaea HOM05D000422 ORTHO05D001248 8.6e-06 53.9 29 93.1
Os12g0230100 Oryza sativa ssp. japonica HOM05D000422 ORTHO05D001248 8.6e-06 53.9 30 90.0
SalBow7G0009 Salvia bowleyana HOM05D000422 ORTHO05D001248 8.6e-06 53.9 30 90.0
unitig_52.g17035 Utricularia gibba HOM05D000422 ORTHO05D001248 8.6e-06 53.9 30 90.0
Zm00001eb411490 Zea mays HOM05D000422 ORTHO05D001248 8.6e-06 53.9 30 90.0


User provided reference genes

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