Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33405H Brassica oleracea HOM05D002336 ORTHO05D002526 8.9e-41 169.9 87 100.0
BcaB08g37172 Brassica carinata HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
A02p00240 Brassica napus HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
A03p04330 Brassica napus HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
BolC2t06378H Brassica oleracea HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
BraA02t05008Z Brassica rapa HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
BraA03t09777Z Brassica rapa HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
Carub.0006s0836 Capsella rubella HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
CARHR203410 Cardamine hirsuta HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
Thhalv10014976m.g Eutrema salsugineum HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
Sp6g33490 Schrenkiella parvula HOM05D002336 ORTHO05D002526 6.0e-29 130.6 70 94.3
HanXRQChr15g0471591 Helianthus annuus HOM05D002336 ORTHO05D002526 1.3e-28 129.4 70 92.9
AL6G20340 Arabidopsis lyrata HOM05D002336 ORTHO05D002526 1.7e-28 129.0 70 92.9
BcaB05g21520 Brassica carinata HOM05D002336 ORTHO05D002526 1.7e-28 129.0 70 92.9
BcaC03g13284 Brassica carinata HOM05D002336 ORTHO05D002526 1.7e-28 129.0 70 92.9
THA.LOC104799288 Tarenaya hassleriana HOM05D002336 ORTHO05D002526 1.7e-28 129.0 70 91.4
AT5G09920 Arabidopsis thaliana HOM05D002336 ORTHO05D002526 2.3e-28 128.6 70 91.4
BcaC05g28573 Brassica carinata HOM05D002336 ORTHO05D002526 2.3e-28 128.6 70 92.9
C05p46750 Brassica napus HOM05D002336 ORTHO05D002526 2.3e-28 128.6 70 92.9
BolC5t31354H Brassica oleracea HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 92.9
Cc07_g16330 Coffea canephora HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
Eucgr.I00318 Eucalyptus grandis HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
Hma1.2p1_0981F.1_g243690 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
Hma1.2p1_1034F.1_g250410 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
Lsat_1_v5_gn_2_67161 Lactuca sativa HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
QL06p031971 Quercus lobata HOM05D002336 ORTHO05D002526 3.0e-28 128.3 70 91.4
BolC9t59525H Brassica oleracea HOM05D002336 ORTHO05D002526 3.9e-28 127.9 70 92.9
Glyma.03G088500 Glycine max HOM05D002336 ORTHO05D002526 3.9e-28 127.9 70 91.4
Lalb_Chr07g0194481 Lupinus albus HOM05D002336 ORTHO05D002526 3.9e-28 127.9 70 91.4
Phvul.010G030200 Phaseolus vulgaris HOM05D002336 ORTHO05D002526 3.9e-28 127.9 70 91.4
VMungo0331G0164 Vigna mungo HOM05D002336 ORTHO05D002526 3.9e-28 127.9 70 91.4
Cpa.g.sc191.12 Carica papaya HOM05D002336 ORTHO05D002526 5.1e-28 127.5 70 90.0
Glyma.16G084800 Glycine max HOM05D002336 ORTHO05D002526 5.1e-28 127.5 70 90.0
Aa31LG3G17210 Aethionema arabicum HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 90.0
CSS0001624 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 90.0
ClCG11G005590 Citrullus lanatus HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 91.4
MELO3C020022.2 Cucumis melo HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 91.4
CsaV3_6G002410 Cucumis sativus L. HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 91.4
Lj3g0026600 Lotus japonicus HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 91.4
Manes.08G141900 Manihot esculenta HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 90.0
Manes.09G146500 Manihot esculenta HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 90.0
Sabra07G0067500 Salix brachista HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 90.0
Sed0026127 Sechium edule HOM05D002336 ORTHO05D002526 6.6e-28 127.1 70 91.4
arahy.Tifrunner.gnm1.ann1.P3KF1U Arachis hypogaea HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 90.0
BcaC05g26588 Brassica carinata HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 91.4
BolC5t31351H Brassica oleracea HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 91.4
Glyma.05G189100 Glycine max HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 90.0
PGR102G1725 Punica granatum HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 90.0
Thecc.01G114000 Theobroma cacao HOM05D002336 ORTHO05D002526 8.6e-28 126.7 70 90.0
Atru.chr8.85 Acer truncatum HOM05D002336 ORTHO05D002526 1.1e-27 126.3 70 88.6
Actinidia27104 Actinidia chinensis HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 88.6
CSS0019375 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 88.6
Ca_22452_v3 Cicer arietinum L. HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 90.0
Ca_23195_v3 Cicer arietinum L. HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 90.0
Potri.005G084900 Populus trichocarpa HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 88.6
Potri.007G080400 Populus trichocarpa HOM05D002336 ORTHO05D002526 1.5e-27 125.9 70 88.6
BolC5t31347H Brassica oleracea HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 90.0
Duzib187G0505 Durio zibethinus HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Duzib264G0264 Durio zibethinus HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gohir.A09G214900 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gohir.A10G084400 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gohir.D09G217400 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gohir.D10G104250 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gorai.006G238100 Gossypium raimondii HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Gorai.011G113800 Gossypium raimondii HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
Nitab4.5_0002183g0070 Nicotiana tabacum HOM05D002336 ORTHO05D002526 1.9e-27 125.6 70 88.6
BcaC05g26585 Brassica carinata HOM05D002336 ORTHO05D002526 2.5e-27 125.2 70 90.0
COL.COLO4_11002 Corchorus olitorius HOM05D002336 ORTHO05D002526 2.5e-27 125.2 69 91.3
Rhsim02G0083000 Rhododendron simsii HOM05D002336 ORTHO05D002526 2.5e-27 125.2 70 87.1
Ciclev10026735m.g Citrus clementina HOM05D002336 ORTHO05D002526 3.3e-27 124.8 70 87.1
GSVIVG01020782001 Vitis vinifera HOM05D002336 ORTHO05D002526 3.3e-27 124.8 70 87.1
CsaV3_5G039120 Cucumis sativus L. HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 90.0
FvH4_1g22750 Fragaria vesca HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
FAN19G2422 Fragaria x ananassa HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
FAN23G2858 Fragaria x ananassa HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
FAN26G2884 Fragaria x ananassa HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
FAN28G0203 Fragaria x ananassa HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
RcHm_v2.0_Chr2g0117051 Rosa chinensis HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 88.6
PGSC0003DMG400005907 Solanum tuberosum HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 87.1
TWI53G1839 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 4.3e-27 124.4 70 87.1
A10p27560 Brassica napus HOM05D002336 ORTHO05D002526 5.6e-27 124.0 68 92.6
BraA10t44808Z Brassica rapa HOM05D002336 ORTHO05D002526 5.6e-27 124.0 68 92.6
CSS0043110 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 5.6e-27 124.0 70 88.6
MELO3C022087.2 Cucumis melo HOM05D002336 ORTHO05D002526 5.6e-27 124.0 70 88.6
MD15G1331500 Malus domestica HOM05D002336 ORTHO05D002526 5.6e-27 124.0 70 87.1
Medtr8g011890 Medicago truncatula HOM05D002336 ORTHO05D002526 5.6e-27 124.0 70 90.0
Oeu031443.2 Olea europaea HOM05D002336 ORTHO05D002526 5.6e-27 124.0 86 76.7
Prupe.6G171500 Prunus persica HOM05D002336 ORTHO05D002526 7.3e-27 123.6 70 87.1
Sc15g0006500 Simmondsia chinensis HOM05D002336 ORTHO05D002526 7.3e-27 123.6 70 87.1
Solyc06g073870.4 Solanum lycopersicum HOM05D002336 ORTHO05D002526 7.3e-27 123.6 70 85.7
Sopen06g030280 Solanum pennellii HOM05D002336 ORTHO05D002526 7.3e-27 123.6 70 85.7
TPR.G24320 Trifolium pratense HOM05D002336 ORTHO05D002526 7.3e-27 123.6 70 88.6
C09p67630 Brassica napus HOM05D002336 ORTHO05D002526 9.5e-27 123.2 71 91.5
TAR628G0102 Trochodendron aralioides HOM05D002336 ORTHO05D002526 1.2e-26 122.9 70 87.1
DCAR_014263 Daucus carota HOM05D002336 ORTHO05D002526 1.6e-26 122.5 70 85.7
Dinv42686 Davidia involucrata HOM05D002336 ORTHO05D002526 1.6e-26 122.5 70 87.1
ECA238G1091 Erigeron canadensis HOM05D002336 ORTHO05D002526 1.6e-26 122.5 70 87.1
Psat4g205400 Pisum sativum HOM05D002336 ORTHO05D002526 1.6e-26 122.5 70 88.6
TPR.G29359 Trifolium pratense HOM05D002336 ORTHO05D002526 1.6e-26 122.5 70 88.6
CAN.G1463.20 Capsicum annuum HOM05D002336 ORTHO05D002526 2.1e-26 122.1 70 85.7
ATR0618G064 Amborella trichopoda HOM05D002336 ORTHO05D002526 2.8e-26 121.7 70 84.3
BcaB01g05556 Brassica carinata HOM05D002336 ORTHO05D002526 2.8e-26 121.7 70 91.4
CANSAT01G2839 Cannabis sativa HOM05D002336 ORTHO05D002526 2.8e-26 121.7 70 85.7
MBI06_g12321_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 4.7e-26 120.9 70 84.3
Sed0001348 Sechium edule HOM05D002336 ORTHO05D002526 4.7e-26 120.9 70 87.1
vmacro15951 Vaccinium macrocarpon HOM05D002336 ORTHO05D002526 4.7e-26 120.9 70 85.7
MSTRG.17671 Avicennia marina HOM05D002336 ORTHO05D002526 6.2e-26 120.6 70 85.7
SalBow6G1409 Salvia bowleyana HOM05D002336 ORTHO05D002526 2.3e-25 118.6 70 84.3
Peaxi162Scf00098g01412 Petunia axillaris HOM05D002336 ORTHO05D002526 3.1e-25 118.2 69 85.5
MBI12_g16727_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 5.2e-25 117.5 70 82.9
Nitab4.5_0005569g0010 Nicotiana tabacum HOM05D002336 ORTHO05D002526 5.2e-25 117.5 70 85.7
Migut.N02435 Erythranthe guttata HOM05D002336 ORTHO05D002526 8.9e-25 116.7 70 84.3
Aqoxy6G00465 Aquilegia oxysepala HOM05D002336 ORTHO05D002526 1.2e-24 116.3 69 87.0
Nitab4.5_0002426g0100 Nicotiana tabacum HOM05D002336 ORTHO05D002526 1.2e-24 116.3 70 84.3
Peaxi162Scf00717g00212 Petunia axillaris HOM05D002336 ORTHO05D002526 1.5e-24 115.9 70 82.9
CDE04G0107 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 3.4e-24 114.8 67 85.1
MBI12_g40059_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 5.8e-24 114.0 70 81.4
Nn5g28888 Nelumbo nucifera HOM05D002336 ORTHO05D002526 7.5e-24 113.6 70 84.3
BcaC05g26591 Brassica carinata HOM05D002336 ORTHO05D002526 9.9e-24 113.2 90 72.2
Os02g0116900 Oryza sativa ssp. japonica HOM05D002336 ORTHO05D002526 9.9e-24 113.2 71 80.3
Ah.15g091530 Amaranthus hybridus HOM05D002336 ORTHO05D002526 2.2e-23 112.1 70 78.6
AUR62008826 Chenopodium quinoa HOM05D002336 ORTHO05D002526 3.7e-23 111.3 70 77.1
Hund08720 Selenicereus undatus HOM05D002336 ORTHO05D002526 3.7e-23 111.3 70 75.7
SGA_v2.0_scaffold10G05088 Striga asiatica HOM05D002336 ORTHO05D002526 3.7e-23 111.3 70 80.0
SGA_v2.0_scaffold16G07523 Striga asiatica HOM05D002336 ORTHO05D002526 3.7e-23 111.3 70 80.0
EL10Ac5g11594 Beta vulgaris HOM05D002336 ORTHO05D002526 4.9e-23 110.9 71 76.1
EL10Ac7g17722 Beta vulgaris HOM05D002336 ORTHO05D002526 4.9e-23 110.9 71 76.1
arahy.Tifrunner.gnm1.ann1.34WJMU Arachis hypogaea HOM05D002336 ORTHO05D002526 8.3e-23 110.2 102 61.8
AUR62025415 Chenopodium quinoa HOM05D002336 ORTHO05D002526 1.9e-22 109.0 70 75.7
PSO170G6293 Papaver somniferum HOM05D002336 ORTHO05D002526 7.1e-22 107.1 70 75.7
PSO210G1518 Papaver somniferum HOM05D002336 ORTHO05D002526 7.1e-22 107.1 70 75.7
unitig_699.g19459 Utricularia gibba HOM05D002336 ORTHO05D002526 2.7e-21 105.1 70 77.1
HPP92_022163 Vanilla planifolia HOM05D002336 ORTHO05D002526 6.0e-21 104.0 71 71.8
RcHm_v2.0_Chr6g0293821 Rosa chinensis HOM05D002336 ORTHO05D002526 7.8e-21 103.6 67 79.1
C03p04780 Brassica napus HOM05D002336 ORTHO05D002526 6.6e-20 100.5 52 96.2
BolC3t13012H Brassica oleracea HOM05D002336 ORTHO05D002526 8.6e-20 100.1 54 92.6
ClCG11G005330 Citrullus lanatus HOM05D002336 ORTHO05D002526 5.6e-19 97.4 54 87.0
Nitab4.5_0000875g0080 Nicotiana tabacum HOM05D002336 ORTHO05D002526 5.6e-19 97.4 54 87.0
Cpa.g.sc3.343 Carica papaya HOM05D002336 ORTHO05D002526 9.5e-19 96.7 67 70.1
TWI81G0046 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 1.6e-18 95.9 71 64.8
Pp3c9_19820 Physcomitrium patens HOM05D002336 ORTHO05D002526 4.7e-18 94.4 66 65.2
CANSAT01G3015 Cannabis sativa HOM05D002336 ORTHO05D002526 8.1e-18 93.6 71 73.2
Mapoly0173s0018 Marchantia polymorpha HOM05D002336 ORTHO05D002526 1.8e-17 92.4 66 69.7
SMO340G0158 Selaginella moellendorffii HOM05D002336 ORTHO05D002526 2.4e-17 92.0 66 66.7
AagrBONN_evm.TU.Sc2ySwM_344.663 Anthoceros agrestis HOM05D002336 ORTHO05D002526 5.2e-17 90.9 65 69.2
CDE08G1499 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 1.5e-16 89.4 53 83.0
Aa31LG3G17230 Aethionema arabicum HOM05D002336 ORTHO05D002526 8.4e-15 83.6 46 89.1
MD06G1233600 Malus domestica HOM05D002336 ORTHO05D002526 2.4e-14 82.0 63 61.9
MD14G1240400 Malus domestica HOM05D002336 ORTHO05D002526 2.4e-14 82.0 63 61.9
Prupe.5G238000 Prunus persica HOM05D002336 ORTHO05D002526 2.4e-14 82.0 67 61.2
RcHm_v2.0_Chr7g0177821 Rosa chinensis HOM05D002336 ORTHO05D002526 3.5e-13 78.2 63 63.5
BcaNung06948 Brassica carinata HOM05D002336 ORTHO05D002526 1.3e-12 76.3 70 64.3
CiPaw.04G091200 Carya illinoinensis HOM05D002336 ORTHO05D002526 3.9e-12 74.7 46 80.4
CBR_g17935 Chara braunii HOM05D002336 ORTHO05D002526 5.1e-12 74.3 69 58.0
Glyma.08G146800 Glycine max HOM05D002336 ORTHO05D002526 5.1e-12 74.3 67 62.7
Zm00001eb209440 Zea mays HOM05D002336 ORTHO05D002526 7.3e-11 70.5 49 73.5
A07p02210 Brassica napus HOM05D002336 ORTHO05D002526 1.8e-09 65.9 42 85.7
PGSC0003DMG400046105 Solanum tuberosum HOM05D002336 ORTHO05D002526 1.2e-08 63.2 77 50.6
CSS0044895 Camellia sinensis var. sinensis HOM05D000996 ORTHO05D000858 3.8e-07 58.2 34 70.6


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