Gene: Potri.007G080400
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.007G080400
- Transcript Identifier Potri.007G080400.1
- Gene Type Coding gene
- Location Chr07 : 10480018-10482006 : positive
Gene Family Information
- ID HOM05D002336
- #Genes/#Species 290/97
- Phylogenetic origin
- ID ORTHO05D002526
- #Genes/#Species 282/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.007G080400.v4.1
- pacid 42766644
- synonym POPTR_0007s06660
Descriptions
- Description K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0044237 | IEA | InterPro | cellular metabolic process | |
| GO:0006366 | ISO | PLAZA Integrative Orthology | transcription by RNA polymerase II | AT5G09920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0003899 | ISO | PLAZA Integrative Orthology | DNA-directed 5'-3' RNA polymerase activity | AT5G09920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030880 | IEA | InterPro | RNA polymerase complex | |
| GO:0005665 | ISO | PLAZA Integrative Orthology | RNA polymerase II, core complex | AT5G09920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.1.6.2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 4 |