Gene: Carub.0006s0836

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s0836
  • Transcript Identifier Carub.0006s0836.1
  • Gene Type Coding gene
  • Location scaffold_6 : 3042345-3043442 : positive

Gene Family Information

  • ID HOM05D002336
  • #Genes/#Species 290/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s0836.v1.1
  • pacid 39246740
  • synonym Carubv10002229m.g

Descriptions

  • Description K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044237
IEA
InterProcellular metabolic process
GO:0006352
IEA
InterProDNA-templated transcription, initiation
GO:0006366
ISO
PLAZA Integrative Orthologytranscription by RNA polymerase II AT5G09920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0003899
ISO
PLAZA Integrative OrthologyDNA-directed 5'-3' RNA polymerase activity AT5G09920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030880
IEA
InterProRNA polymerase complex
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT5G09920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010997 HRDC-like superfamily
IPR038324 Rpb4/RPC9 superfamily
IPR005574 RNA polymerase subunit RPB4/RPC9
IPR006590 RNA polymerase Rpb4/RPC9, core
Mapman id Description
15.1.6.2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 4