Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 1.6e-246 855.9 513 100.0
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.1e-244 849.7 513 99.2
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 9.6e-244 846.7 511 99.2
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 9.6e-244 846.7 511 99.2
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 1.5e-241 839.3 513 93.8
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 3.0e-237 825.1 513 92.0
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 8.2e-235 817.0 520 96.0
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 1.9e-231 805.8 513 89.3
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 4.6e-230 801.2 513 91.6
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 6.9e-226 787.3 513 90.3
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 8.8e-221 770.4 511 86.3
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.1e-220 770.0 500 89.4
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 1.7e-219 766.1 511 84.9
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 2.8e-219 765.4 513 89.1
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 3.7e-219 765.0 511 85.3
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 1.1e-218 763.5 511 85.3
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.2e-217 760.0 511 84.3
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 2.0e-217 759.2 511 87.1
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 3.4e-217 758.4 513 89.7
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 5.9e-217 757.7 513 86.4
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 1.3e-216 756.5 513 87.9
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.7e-216 756.1 511 87.1
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 1.7e-216 756.1 511 84.5
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 1.1e-215 753.4 511 86.7
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 1.9e-215 752.7 509 83.9
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 7.2e-215 750.7 511 84.7
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 2.1e-214 749.2 511 86.9
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 1.8e-213 746.1 513 86.9
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 1.8e-213 746.1 511 86.1
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 2.3e-213 745.7 511 86.7
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 3.9e-213 745.0 511 83.0
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 4.4e-212 741.5 511 85.9
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 9.7e-212 740.3 511 85.1
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 1.3e-211 740.0 511 86.1
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 1.3e-211 740.0 511 85.9
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 1.7e-211 739.6 511 85.5
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 2.2e-211 739.2 511 85.3
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 3.7e-211 738.4 513 84.4
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 8.2e-211 737.3 513 84.4
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.4e-210 736.5 511 83.2
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 1.4e-210 736.5 513 85.2
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 3.1e-210 735.3 511 85.7
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 3.1e-210 735.3 511 84.9
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 9.1e-210 733.8 511 85.3
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 1.5e-209 733.0 511 85.1
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 1.5e-209 733.0 511 84.7
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.6e-209 732.3 511 84.0
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 2.6e-209 732.3 510 82.2
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 2.6e-209 732.3 511 84.7
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 4.5e-209 731.5 511 85.1
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 5.9e-209 731.1 511 84.5
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 7.7e-209 730.7 511 85.5
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 7.7e-209 730.7 511 84.9
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 7.7e-209 730.7 511 85.7
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 1.0e-208 730.3 511 83.0
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 1.0e-208 730.3 533 75.6
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.0e-208 730.3 511 83.8
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 1.7e-208 729.6 504 85.5
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 2.2e-208 729.2 511 82.2
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.2e-208 729.2 511 82.2
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 2.9e-208 728.8 511 84.5
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 2.9e-208 728.8 511 85.3
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 2.9e-208 728.8 511 85.5
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 3.8e-208 728.4 512 85.4
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 6.5e-208 727.6 513 86.5
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 8.5e-208 727.2 510 84.5
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.1e-207 726.9 511 84.5
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 4.2e-207 724.9 512 84.4
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 7.2e-207 724.2 512 82.8
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 9.4e-207 723.8 511 84.1
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 1.2e-206 723.4 511 85.1
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 1.6e-206 723.0 512 82.6
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 1.4e-205 719.9 512 82.6
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.6e-204 715.7 536 76.7
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.6e-204 715.7 539 78.1
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 5.7e-204 714.5 511 83.8
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 7.4e-204 714.1 512 83.8
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 9.7e-204 713.8 511 84.3
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 9.7e-204 713.8 511 84.3
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 2.2e-203 712.6 511 83.8
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.2e-203 712.6 504 84.7
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 2.8e-203 712.2 511 83.6
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 6.3e-203 711.1 504 83.7
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.8e-202 709.5 511 82.0
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 2.4e-202 709.1 511 81.4
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 2.6e-201 705.7 511 80.8
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 5.9e-201 704.5 504 80.6
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 3.8e-200 701.8 511 83.0
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 3.2e-199 698.7 507 81.7
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 3.2e-199 698.7 517 80.3
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 6.3e-195 684.5 511 79.8
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 3.5e-193 678.7 511 72.0
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.3e-192 676.8 511 73.8
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.6e-190 668.7 485 82.5
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.3e-189 666.0 511 78.3
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 8.8e-189 664.1 507 80.5
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 8.8e-189 664.1 511 75.9
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 1.2e-188 663.7 549 69.6
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 2.6e-188 662.5 532 75.0
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 2.2e-187 659.4 513 82.3
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 1.1e-186 657.1 511 77.5
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 5.4e-186 654.8 554 72.2
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 8.6e-184 647.5 465 86.0
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.9e-183 646.4 484 81.8
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 1.2e-182 643.7 513 69.0
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.8e-181 639.8 461 86.1
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 1.5e-180 636.7 523 75.0
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 9.2e-170 600.9 511 75.5
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.3e-168 596.3 428 84.3
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 2.1e-166 589.7 435 79.5
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 2.0e-164 583.2 430 84.4
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 4.7e-150 535.4 512 65.2
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 6.2e-142 508.4 403 78.9
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 5.6e-135 485.3 266 89.8
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 4.3e-127 459.1 251 90.0
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 6.9e-117 425.2 322 81.1
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 1.6e-113 414.1 304 77.6
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 4.8e-110 402.5 382 59.7
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 9.1e-101 371.7 207 89.9
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 2.0e-100 370.5 207 89.4
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 8.5e-83 312.0 365 67.7
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 8.8e-72 275.4 528 39.2
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 3.7e-70 270.0 257 73.2
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 1.1e-69 268.5 519 45.7
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 6.1e-65 252.7 185 78.9
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 3.9e-59 233.4 130 90.0
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 8.6e-43 179.1 254 40.2
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 9.5e-42 175.6 99 81.8
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.7e-38 164.9 125 64.8
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 3.2e-37 160.6 80 93.8
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.7e-35 154.8 137 67.9
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 6.2e-33 146.4 295 33.9
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 2.0e-31 141.4 179 48.6
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 5.8e-31 139.8 107 68.2
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 1.7e-30 138.3 77 87.0
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 3.8e-30 137.1 70 95.7
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.6e-28 131.7 69 95.7
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 1.3e-27 128.6 64 96.9
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 1.3e-27 128.6 64 96.9
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 5.3e-24 116.7 56 92.9
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 2.5e-18 97.8 56 75.0
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 3.3e-18 97.4 50 88.0
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 2.4e-16 91.3 100 48.0
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 2.4e-16 91.3 100 48.0
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 4.0e-16 90.5 47 93.6
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 8.4e-14 82.8 44 79.5
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 1.6e-12 78.6 44 75.0
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 5.1e-11 73.6 134 70.9
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 6.7e-11 73.2 105 41.0
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 1.1e-10 72.4 36 86.1
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 1.4e-08 65.5 35 88.6
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 5.3e-08 63.5 33 78.8
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 1.0e-06 59.3 60 58.3


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