Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 2.2e-174 615.5 308 100.0
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 2.2e-142 509.2 314 79.0
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.3e-139 499.2 308 82.8
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 6.6e-139 497.7 309 79.9
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 3.3e-138 495.4 307 79.8
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 9.5e-138 493.8 307 79.8
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 8.0e-137 490.7 309 78.3
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 2.0e-135 486.1 309 78.3
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 2.2e-134 482.6 309 78.6
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.9e-134 482.3 308 77.9
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 1.1e-133 480.3 342 71.9
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.0e-132 476.1 295 79.3
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 2.0e-132 476.1 304 77.0
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 2.0e-132 476.1 304 78.0
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 3.5e-132 475.3 309 76.7
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 4.6e-132 474.9 309 77.0
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 4.6e-132 474.9 308 76.6
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 7.8e-132 474.2 306 76.8
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 7.8e-132 474.2 309 77.7
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.3e-131 473.4 306 76.8
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.3e-131 473.4 308 76.3
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 8.6e-131 470.7 309 76.4
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 8.6e-131 470.7 309 75.7
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.1e-130 470.3 306 75.8
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 3.3e-130 468.8 310 75.5
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.6e-129 466.5 309 75.7
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.1e-129 464.2 348 68.1
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.1e-128 463.8 309 74.8
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 8.9e-128 460.7 309 73.8
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 2.0e-127 459.5 291 78.0
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 2.6e-127 459.1 309 74.1
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 3.7e-126 455.3 308 74.4
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 8.3e-126 454.1 309 72.5
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.1e-125 453.8 308 72.1
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.4e-125 452.6 297 75.4
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.2e-125 450.7 314 71.7
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.6e-124 449.9 309 73.8
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 2.7e-124 449.1 308 71.8
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.7e-123 446.4 309 70.9
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 3.9e-123 445.3 310 72.9
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 6.6e-123 444.5 420 57.4
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 1.5e-122 443.4 285 76.8
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 4.3e-122 441.8 309 71.5
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 2.8e-121 439.1 309 70.6
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 6.2e-121 438.0 304 72.7
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 6.2e-121 438.0 304 72.7
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 2.4e-120 436.0 309 70.6
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 2.6e-119 432.6 308 67.9
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 3.4e-119 432.2 309 71.2
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 4.4e-119 431.8 309 70.2
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 7.6e-119 431.0 309 69.3
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 1.1e-117 427.2 309 70.6
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 1.2e-116 423.7 306 69.6
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 1.2e-116 423.7 308 69.2
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.6e-116 423.3 309 68.3
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 7.8e-116 421.0 310 65.8
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.0e-115 420.6 295 71.9
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.0e-115 420.6 309 66.3
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 1.5e-114 416.8 296 69.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 4.7e-113 411.8 312 65.1
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 4.7e-113 411.8 309 68.0
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 6.2e-113 411.4 309 68.0
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.1e-112 410.6 308 67.9
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 1.4e-112 410.2 309 68.0
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.4e-112 410.2 307 67.8
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.4e-112 410.2 309 67.6
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 1.8e-112 409.8 308 67.5
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 4.0e-112 408.7 272 75.7
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 5.8e-111 404.8 308 66.9
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 9.9e-111 404.1 309 66.7
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.3e-110 403.7 309 66.3
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 2.9e-110 402.5 310 67.1
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 2.4e-109 399.4 309 65.7
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 7.1e-109 397.9 309 65.4
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 5.3e-104 381.7 329 61.7
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.0e-103 379.8 259 73.0
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 3.4e-103 379.0 325 63.4
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 7.6e-103 377.9 309 65.0
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 7.9e-100 367.9 303 64.7
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.3e-99 366.3 303 65.0
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.7e-99 364.8 270 69.3
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.9e-98 363.2 315 62.2
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 9.6e-98 360.9 309 58.3
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 3.7e-97 359.0 308 61.0
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 3.1e-96 355.9 308 60.7
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 8.4e-94 347.8 256 71.1
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 2.5e-90 336.3 232 72.0
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 1.3e-89 334.0 320 58.1
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 6.2e-89 331.6 228 71.5
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.2e-85 318.9 306 51.0
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 2.1e-84 316.6 307 51.5
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.2e-76 290.8 174 82.8
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.6e-76 290.4 306 50.0
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.1e-74 284.3 311 48.6
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.1e-68 263.5 310 46.1
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.6e-63 246.5 186 69.9
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 2.6e-58 229.9 307 46.6
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-56 224.6 172 68.6
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 1.0e-54 218.0 167 65.9
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.5e-50 204.1 135 75.6
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 5.2e-43 179.1 134 68.7
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 8.6e-38 161.8 118 65.3
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 1.5e-34 151.0 309 35.0
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.7e-33 146.4 104 66.3
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 1.1e-29 134.8 103 70.9
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 1.7e-25 120.9 314 29.9
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.1e-19 101.7 73 64.4
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 3.1e-19 100.1 65 75.4
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 1.2e-18 98.2 84 60.7
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 1.5e-18 97.8 296 29.1
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 2.2e-17 94.0 57 71.9
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 6.4e-17 92.4 78 64.1
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 1.5e-10 71.2 84 48.8


User provided reference genes

Program Settings