Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03197 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 6.2e-64 247.3 123 100.0
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 6.6e-50 200.7 115 82.6
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 6.6e-50 200.7 115 83.5
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 6.6e-50 200.7 115 83.5
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 7.3e-49 197.2 115 83.5
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 4.0e-47 191.4 115 80.0
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 6.9e-47 190.7 115 78.3
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 1.2e-46 189.9 115 79.1
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 2.0e-46 189.1 115 77.4
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 3.4e-46 188.3 115 75.7
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 3.4e-46 188.3 115 79.1
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 3.4e-46 188.3 115 79.1
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 4.5e-46 188.0 115 77.4
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 5.8e-46 187.6 117 75.2
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 7.6e-46 187.2 115 76.5
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 9.9e-46 186.8 115 75.7
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 1.3e-45 186.4 115 76.5
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 1.3e-45 186.4 115 78.3
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 1.7e-45 186.0 115 75.7
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 1.7e-45 186.0 115 75.7
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 1.7e-45 186.0 115 76.5
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 2.9e-45 185.3 115 75.7
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 2.9e-45 185.3 115 75.7
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 3.8e-45 184.9 115 78.3
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 3.8e-45 184.9 115 75.7
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 3.8e-45 184.9 115 78.3
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 6.4e-45 184.1 115 75.7
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 6.4e-45 184.1 115 75.7
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 6.4e-45 184.1 111 77.5
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 8.4e-45 183.7 115 75.7
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 8.4e-45 183.7 115 74.8
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 8.4e-45 183.7 115 74.8
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 1.1e-44 183.3 115 75.7
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 1.1e-44 183.3 115 75.7
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 1.1e-44 183.3 115 74.8
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 1.4e-44 183.0 115 73.9
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.4e-44 183.0 117 75.2
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.4e-44 183.0 117 75.2
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 1.9e-44 182.6 115 73.0
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 2.4e-44 182.2 115 74.8
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 2.4e-44 182.2 115 73.9
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 3.2e-44 181.8 115 76.5
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 3.2e-44 181.8 114 73.7
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 4.2e-44 181.4 115 74.8
FAN15G2140 Fragaria x ananassa HOM05D005175 ORTHO05D006302 4.2e-44 181.4 117 75.2
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 5.4e-44 181.0 115 75.7
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 7.1e-44 180.6 115 73.9
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 7.1e-44 180.6 115 73.9
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 9.3e-44 180.3 115 72.2
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 9.3e-44 180.3 115 73.9
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 9.3e-44 180.3 115 73.9
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 1.2e-43 179.9 115 73.9
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 1.2e-43 179.9 115 73.9
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 1.2e-43 179.9 115 73.9
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 1.6e-43 179.5 115 75.7
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 2.7e-43 178.7 115 75.7
Sopen08g020660 Solanum pennellii HOM05D005175 ORTHO05D006302 2.7e-43 178.7 116 73.3
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 3.5e-43 178.3 115 73.9
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 3.5e-43 178.3 115 73.0
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 4.6e-43 177.9 115 73.9
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 6.0e-43 177.6 115 73.9
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 7.9e-43 177.2 115 72.2
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 7.9e-43 177.2 115 71.3
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 7.9e-43 177.2 115 72.2
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 7.9e-43 177.2 118 71.2
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 7.9e-43 177.2 109 76.1
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 1.0e-42 176.8 112 72.3
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 1.3e-42 176.4 115 72.2
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 1.3e-42 176.4 115 71.3
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 6.7e-42 174.1 115 70.4
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 8.7e-42 173.7 123 69.9
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 1.1e-41 173.3 115 68.7
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 1.5e-41 172.9 123 69.1
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 1.5e-41 172.9 115 69.6
Hma1.2p1_0774F.1_g216370 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.5e-41 172.9 107 76.6
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 1.9e-41 172.6 109 76.1
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 1.9e-41 172.6 111 73.0
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 4.3e-41 171.4 115 68.7
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 4.3e-41 171.4 115 68.7
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 5.6e-41 171.0 115 68.7
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 7.4e-41 170.6 111 70.3
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 7.4e-41 170.6 115 67.0
Lj1g0020257 Lotus japonicus HOM05D005175 ORTHO05D006302 9.6e-41 170.2 115 68.7
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 1.3e-40 169.9 115 67.0
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 2.1e-40 169.1 115 68.7
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 2.8e-40 168.7 110 73.6
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 1.1e-39 166.8 109 73.4
Hma1.2p1_0774F.1_g216280 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 2.4e-39 165.6 108 73.1
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 4.0e-39 164.9 115 65.2
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 4.0e-39 164.9 118 65.3
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 4.0e-39 164.9 118 65.3
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 5.3e-39 164.5 115 68.7
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 1.2e-38 163.3 115 69.6
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 1.2e-38 163.3 109 72.5
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 6.4e-37 157.5 132 60.6
RcHm_v2.0_Chr6g0305271 Rosa chinensis HOM05D005175 ORTHO05D006302 2.5e-33 145.6 108 67.6
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 2.1e-32 142.5 112 63.4
Ciclev10010872m.g Citrus clementina HOM05D005175 ORTHO05D006302 8.2e-32 140.6 108 64.8
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 2.0e-30 136.0 111 57.7
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 2.0e-30 136.0 115 59.1
FAN27G1436 Fragaria x ananassa HOM05D005175 ORTHO05D006302 5.8e-30 134.4 117 58.1
AL1G56380 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 1.0e-29 133.7 84 75.0
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 1.7e-29 132.9 111 55.9
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 1.7e-29 132.9 111 56.8
COL.COLO4_17864 Corchorus olitorius HOM05D005175 ORTHO05D006302 1.4e-28 129.8 74 79.7
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 1.9e-28 129.4 97 64.9
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 3.2e-28 128.6 115 57.4
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 3.2e-28 128.6 73 80.8
Hma1.2p1_0184F.1_g081320 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.2e-27 126.7 75 74.7
Zm00001eb265700 Zea mays HOM05D003504 ORTHO05D004006 2.7e-27 125.6 134 47.0
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 1.8e-26 122.9 80 72.5
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 2.3e-26 122.5 76 76.3
Zm00001eb292470 Zea mays HOM05D001423 ORTHO05D000709 8.7e-26 120.6 132 47.0
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 9.7e-25 117.1 115 54.8
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 2.4e-23 112.5 73 67.1
CBR_g16978 Chara braunii HOM05D005175 ORTHO05D006302 1.9e-20 102.8 114 45.6
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 7.9e-19 97.4 130 50.0
Cre14.g624500 Chlamydomonas reinhardtii HOM05D005175 ORTHO05D006302 1.8e-18 96.3 110 44.5
Zm00001eb389000 Zea mays HOM05D001423 ORTHO05D004006 1.8e-18 96.3 70 60.0
AT2G07110 Arabidopsis thaliana HOM05D005175 ORTHO05D038629 2.9e-13 79.0 116 46.6
MCO03G324 Micromonas commoda HOM05D005175 ORTHO05D006302 5.0e-13 78.2 104 39.4
Gohir.A06G093501 Gossypium hirsutum HOM05D005175 ORTHO05D006302 9.4e-12 73.9 129 41.9
AL6G48610 Arabidopsis lyrata HOM05D005175 ORTHO05D038629 2.3e-10 69.3 86 50.0
Haze_21802 Corylus avellana HOM05D005175 ORTHO05D006302 2.0e-09 66.2 43 72.1
MBI18_g28913_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 5.7e-09 64.7 45 66.7
Gohir.D06G093150 Gossypium hirsutum HOM05D005175 ORTHO05D006302 1.7e-08 63.2 44 72.7
Cre06.g284500 Chlamydomonas reinhardtii HOM05D004050 ORTHO05D005162 2.2e-08 62.8 122 31.1
AL5G44010 Arabidopsis lyrata HOM05D004050 ORTHO05D005162 9.1e-07 57.4 122 27.0
AT3G61620 Arabidopsis thaliana HOM05D004050 ORTHO05D005162 9.1e-07 57.4 122 27.0
BcaC07g40663 Brassica carinata HOM05D004050 ORTHO05D005162 1.5e-06 56.6 121 31.4
C08p36470 Brassica napus HOM05D004050 ORTHO05D005162 1.5e-06 56.6 121 31.4
BolC8t51230H Brassica oleracea HOM05D004050 ORTHO05D005162 1.5e-06 56.6 121 31.4
Glyma.17G169500 Glycine max HOM05D005175 ORTHO05D006302 1.5e-06 56.6 39 64.1
Gohir.1Z049557 Gossypium hirsutum HOM05D005175 ORTHO05D006302 1.5e-06 56.6 39 71.8
Zm00001eb340110 Zea mays HOM05D005175 ORTHO05D006302 1.5e-06 56.6 104 37.5
AL9U12120 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 2.0e-06 56.2 33 75.8
FAN28G1291 Fragaria x ananassa HOM05D005175 ORTHO05D006302 2.0e-06 56.2 42 57.1
Aa31LG10G15380 Aethionema arabicum HOM05D004050 ORTHO05D005162 2.6e-06 55.8 121 28.9
Zm00001eb343390 Zea mays HOM05D004050 ORTHO05D005162 2.6e-06 55.8 120 31.7
BraA09t40791Z Brassica rapa HOM05D004050 ORTHO05D005162 3.4e-06 55.5 121 28.1
FAN09G0664 Fragaria x ananassa HOM05D005175 ORTHO05D006302 4.5e-06 55.1 33 72.7
Os09g0252000 Oryza sativa ssp. japonica HOM05D004050 ORTHO05D005162 4.5e-06 55.1 120 31.7
Peaxi162Scf01012g00123 Petunia axillaris HOM05D004050 ORTHO05D005162 4.5e-06 55.1 122 30.3
Carub.0005s2831 Capsella rubella HOM05D004050 ORTHO05D005162 5.9e-06 54.7 122 27.0
Carub.0006s1683 Capsella rubella HOM05D004050 ORTHO05D005162 5.9e-06 54.7 122 27.0
CARHR171930 Cardamine hirsuta HOM05D004050 ORTHO05D005162 5.9e-06 54.7 122 27.0
Sp5g01790 Schrenkiella parvula HOM05D004050 ORTHO05D005162 5.9e-06 54.7 121 27.3
BcaB02g07365 Brassica carinata HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 27.3
BcaC08g45143 Brassica carinata HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 27.3
A07p25630 Brassica napus HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 27.3
C06p27620 Brassica napus HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 27.3
BraA07t30204Z Brassica rapa HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 27.3
CAN.G986.49 Capsicum annuum HOM05D004050 ORTHO05D005162 7.7e-06 54.3 122 29.5
THA.LOC104817331 Tarenaya hassleriana HOM05D004050 ORTHO05D005162 7.7e-06 54.3 121 28.9


User provided reference genes

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