Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02870 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 0.0e+00 1142.9 565 100.0
Aqoxy4G03208 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 1.8e-299 1031.9 565 89.6
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 7.3e-261 903.7 565 76.6
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 1.2e-252 876.3 565 74.0
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 6.8e-251 870.5 565 73.6
GSVIVG01025133001 Vitis vinifera HOM05D003203 ORTHO05D003526 6.8e-251 870.5 565 73.3
QL01p037166 Quercus lobata HOM05D003203 ORTHO05D003526 1.2e-250 869.8 564 72.9
Cfa011365 Carpinus fangiana HOM05D003203 ORTHO05D003526 3.4e-250 868.2 565 72.9
COL.COLO4_25248 Corchorus olitorius HOM05D003203 ORTHO05D003526 7.1e-248 860.5 565 73.1
Eucgr.B02467 Eucalyptus grandis HOM05D003203 ORTHO05D003526 6.0e-247 857.4 565 71.9
Atru.chr3.3692 Acer truncatum HOM05D003203 ORTHO05D003526 1.0e-246 856.7 565 71.5
TWI31G0332 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 1.0e-246 856.7 565 72.4
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 5.1e-246 854.4 565 71.7
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 5.1e-246 854.4 565 71.5
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 4.3e-245 851.3 565 71.5
Gohir.D05G077500 Gossypium hirsutum HOM05D003203 ORTHO05D003526 3.1e-243 845.1 565 70.8
Duzib168G0563 Durio zibethinus HOM05D003203 ORTHO05D003526 4.0e-243 844.7 565 70.8
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 2.0e-242 842.4 565 71.3
Nn2g10680 Nelumbo nucifera HOM05D003203 ORTHO05D003526 2.0e-242 842.4 565 71.5
Gorai.009G078900 Gossypium raimondii HOM05D003203 ORTHO05D003526 7.6e-242 840.5 565 70.6
Potri.016G083100 Populus trichocarpa HOM05D003203 ORTHO05D003526 1.7e-241 839.3 565 70.3
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 2.9e-241 838.6 565 71.0
Peaxi162Scf00389g00932 Petunia axillaris HOM05D003203 ORTHO05D003526 6.4e-241 837.4 565 69.7
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 1.9e-240 835.9 570 69.5
Gohir.A05G074700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 7.1e-240 833.9 565 69.6
PSO063G5461 Papaver somniferum HOM05D003203 ORTHO05D003526 9.3e-240 833.6 566 71.6
RcHm_v2.0_Chr4g0389641 Rosa chinensis HOM05D003203 ORTHO05D003526 9.3e-240 833.6 570 69.8
VMungo1127G1096 Vigna mungo HOM05D003203 ORTHO05D003526 1.6e-239 832.8 565 69.9
Sabra16G0090500 Salix brachista HOM05D003203 ORTHO05D003526 2.1e-239 832.4 566 70.5
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 4.6e-239 831.2 565 69.4
Ca_19241_v3 Cicer arietinum L. HOM05D003203 ORTHO05D003526 7.9e-239 830.5 567 70.0
Psat7g223280 Pisum sativum HOM05D003203 ORTHO05D003526 7.9e-239 830.5 566 69.4
PSO765G0203 Papaver somniferum HOM05D003203 ORTHO05D003526 1.7e-238 829.3 566 71.0
Glyma.11G152960 Glycine max HOM05D003203 ORTHO05D003526 3.0e-238 828.6 565 69.4
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 3.9e-238 828.2 565 69.4
ATR1159G092 Amborella trichopoda HOM05D003203 ORTHO05D003526 8.7e-238 827.0 565 69.9
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 2.5e-237 825.5 565 69.9
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 7.4e-237 823.9 565 70.1
Thecc.09G260300 Theobroma cacao HOM05D003203 ORTHO05D003526 1.6e-236 822.8 565 70.6
CAN.G553.12 Capsicum annuum HOM05D003203 ORTHO05D003526 3.6e-236 821.6 559 69.1
THA.LOC104815752 Tarenaya hassleriana HOM05D003203 ORTHO05D003526 4.8e-236 821.2 565 68.5
Lalb_Chr03g0027111 Lupinus albus HOM05D003203 ORTHO05D003526 6.2e-236 820.8 565 68.5
MELO3C005030.2 Cucumis melo HOM05D003203 ORTHO05D003526 8.1e-236 820.5 565 69.6
SGA_v2.0_scaffold97G29171 Striga asiatica HOM05D003203 ORTHO05D003526 8.1e-236 820.5 565 67.4
Os07g0191700 Oryza sativa ssp. japonica HOM05D003203 ORTHO05D003526 1.4e-235 819.7 565 69.7
HanXRQChr13g0401461 Helianthus annuus HOM05D003203 ORTHO05D003526 5.3e-235 817.8 565 68.8
FvH4_3g33360 Fragaria vesca HOM05D003203 ORTHO05D003526 1.2e-234 816.6 570 68.4
CsaV3_1G013020 Cucumis sativus L. HOM05D003203 ORTHO05D003526 1.5e-234 816.2 565 69.4
TPR.G14912 Trifolium pratense HOM05D003203 ORTHO05D003526 3.4e-234 815.1 566 67.5
Medtr4g060795 Medicago truncatula HOM05D003203 ORTHO05D003526 5.8e-234 814.3 566 67.8
FvH4_4g02320 Fragaria vesca HOM05D003203 ORTHO05D003526 1.4e-232 809.7 570 68.2
DCAR_006042 Daucus carota HOM05D003203 ORTHO05D003526 1.9e-232 809.3 598 65.6
Phvul.011G072500 Phaseolus vulgaris HOM05D003203 ORTHO05D003526 2.4e-232 808.9 565 68.3
FAN12G0401 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.6e-231 806.2 570 68.1
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 3.5e-231 805.1 565 67.6
Thhalv10006605m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 7.9e-231 803.9 567 66.1
Lj1C185T11 Lonicera japonica HOM05D003203 ORTHO05D003526 3.0e-230 802.0 565 67.4
MSTRG.21144 Avicennia marina HOM05D003203 ORTHO05D003526 3.9e-230 801.6 565 67.6
AL6G53580 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 8.7e-230 800.4 567 66.0
Lj3g0012673 Lotus japonicus HOM05D003203 ORTHO05D003526 1.9e-229 799.3 565 66.7
AT1G07910 Arabidopsis thaliana HOM05D003203 ORTHO05D003526 1.3e-228 796.6 567 65.6
FAN22G0069 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.3e-228 796.6 570 67.2
AL1G18200 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.8e-228 795.4 567 65.6
AL7G46970 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.8e-228 795.4 567 65.8
Zm00001eb302520 Zea mays HOM05D003203 ORTHO05D003526 2.8e-228 795.4 565 66.5
BcaC07g41968 Brassica carinata HOM05D003203 ORTHO05D003526 3.7e-228 795.0 567 65.4
C08p50260 Brassica napus HOM05D003203 ORTHO05D003526 3.7e-228 795.0 567 65.4
BolC8t52555H Brassica oleracea HOM05D003203 ORTHO05D003526 3.7e-228 795.0 567 65.4
Carub.0001s0725 Capsella rubella HOM05D003203 ORTHO05D003526 8.1e-228 793.9 567 65.8
A09p66110 Brassica napus HOM05D003203 ORTHO05D003526 1.1e-227 793.5 567 65.3
BraA09t41949Z Brassica rapa HOM05D003203 ORTHO05D003526 1.1e-227 793.5 567 65.3
arahy.Tifrunner.gnm1.ann1.DWB64P Arachis hypogaea HOM05D003203 ORTHO05D003526 1.8e-227 792.7 571 66.5
Carub.0011s0009 Capsella rubella HOM05D003203 ORTHO05D003526 2.0e-226 789.3 567 65.1
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.0e-226 789.3 606 64.4
arahy.Tifrunner.gnm1.ann1.GJ7521 Arachis hypogaea HOM05D003203 ORTHO05D003526 3.8e-225 785.0 586 64.8
Lsat_1_v5_gn_6_26241 Lactuca sativa HOM05D003203 ORTHO05D003526 2.5e-224 782.3 566 66.3
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 1.6e-223 779.6 611 63.0
Lj3g0020808 Lotus japonicus HOM05D003203 ORTHO05D003526 5.1e-222 774.6 617 60.9
C05p05960 Brassica napus HOM05D003203 ORTHO05D003526 1.5e-221 773.1 567 63.7
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 1.3e-220 770.0 572 65.0
A06p05020 Brassica napus HOM05D003203 ORTHO05D003526 3.7e-220 768.5 567 63.7
BraA06t23708Z Brassica rapa HOM05D003203 ORTHO05D003526 1.4e-219 766.5 567 63.5
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 4.1e-219 765.0 561 63.6
FAN16G3448 Fragaria x ananassa HOM05D003203 ORTHO05D003526 2.6e-218 762.3 570 64.9
FAN11G3892 Fragaria x ananassa HOM05D003203 ORTHO05D003526 4.5e-218 761.5 570 64.9
ECA233G2891 Erigeron canadensis HOM05D003203 ORTHO05D003526 6.5e-217 757.7 565 64.6
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 5.5e-216 754.6 566 64.8
BcaC05g24708 Brassica carinata HOM05D003203 ORTHO05D003526 9.3e-216 753.8 567 62.8
Lj1A185G36 Lonicera japonica HOM05D003203 ORTHO05D003526 4.6e-215 751.5 591 61.6
Aa31sc36G120 Aethionema arabicum HOM05D003203 ORTHO05D003526 1.3e-214 750.0 592 60.3
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 2.8e-212 742.3 579 62.9
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 2.8e-212 742.3 626 59.9
SalBow3G4618 Salvia bowleyana HOM05D003203 ORTHO05D003526 1.2e-210 736.9 581 62.7
unitig_736.g22420 Utricularia gibba HOM05D003203 ORTHO05D003526 1.0e-209 733.8 565 63.4
BcaC07g42504 Brassica carinata HOM05D003203 ORTHO05D003526 9.7e-205 717.2 501 67.3
DCAR_024905 Daucus carota HOM05D003203 ORTHO05D003526 2.8e-204 715.7 567 60.1
Migut.N02091 Erythranthe guttata HOM05D003203 ORTHO05D003526 4.8e-204 714.9 565 62.1
TAR633G1300 Trochodendron aralioides HOM05D003203 ORTHO05D003526 4.8e-204 714.9 446 76.9
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 7.2e-200 701.0 565 60.9
CARHR007720 Cardamine hirsuta HOM05D003203 ORTHO05D003526 4.7e-199 698.4 567 59.8
BcaB02g06702 Brassica carinata HOM05D003203 ORTHO05D003526 7.9e-199 697.6 567 60.1
vmacro14071 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 7.9e-199 697.6 804 47.8
Nitab4.5_0004347g0030 Nicotiana tabacum HOM05D003203 ORTHO05D003526 4.4e-197 691.8 564 60.6
SEGI_33151 Sequoiadendron giganteum HOM05D003203 ORTHO05D003526 1.3e-196 690.3 525 63.4
Nitab4.5_0000848g0100 Nicotiana tabacum HOM05D003203 ORTHO05D003526 7.7e-194 681.0 629 56.8
SalBow6G0781 Salvia bowleyana HOM05D003203 ORTHO05D003526 4.2e-192 675.2 581 58.9
Haze_23916 Corylus avellana HOM05D003203 ORTHO05D003526 1.4e-190 670.2 581 59.2
CDE07G0939 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 7.5e-173 611.3 410 69.0
arahy.Tifrunner.gnm1.ann1.VS5L85 Arachis hypogaea HOM05D003203 ORTHO05D003526 2.8e-172 609.4 468 63.9
SMO223G0015 Selaginella moellendorffii HOM05D003203 ORTHO05D003526 2.3e-169 599.7 565 51.7
AagrBONN_evm.TU.Sc2ySwM_362.2654 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.1e-167 593.2 571 49.4
Mapoly0005s0012 Marchantia polymorpha HOM05D003203 ORTHO05D003526 2.8e-167 592.8 568 53.2
AagrBONN_evm.TU.Sc2ySwM_244.3 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.7e-164 583.6 552 50.4
Nitab4.5_0010520g0020 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.1e-163 580.9 537 55.9
Pp3c27_2850 Physcomitrium patens HOM05D003203 ORTHO05D003526 1.6e-162 577.0 569 50.4
Sc15g0001570 Simmondsia chinensis HOM05D003203 ORTHO05D003526 5.0e-161 572.0 361 74.5
FAN17G1981 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.3e-156 557.4 360 73.1
CAN.G352.40 Capsicum annuum HOM05D003203 ORTHO05D003526 2.5e-152 543.1 348 75.9
PSO339G5999 Papaver somniferum HOM05D003203 ORTHO05D003526 8.1e-143 511.5 346 72.5
HanXRQChr09g0243461 Helianthus annuus HOM05D003203 ORTHO05D003526 1.7e-140 503.8 392 61.7
AagrBONN_evm.TU.Sc2ySwM_341.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.3e-137 494.2 531 46.1
SpUn0831_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 8.6e-137 491.5 322 69.6
Actinidia00021 Actinidia chinensis HOM05D003203 ORTHO05D003526 2.0e-133 480.3 330 69.7
AagrBONN_evm.TU.Sc2ySwM_342.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 7.1e-131 471.9 564 43.4
AagrBONN_evm.TU.Sc2ySwM_117.4033 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.3e-129 467.6 531 45.0
AL7G46960 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 3.0e-129 466.5 357 59.7
SHI27629 Sapria himalayana HOM05D003203 ORTHO05D003526 6.7e-121 438.7 334 64.1
Nitab4.5_0001802g0140 Nicotiana tabacum HOM05D003203 ORTHO05D003526 9.6e-120 434.9 356 62.6
CBR_g39406 Chara braunii HOM05D003203 ORTHO05D003526 1.3e-119 434.5 568 40.0
Thhalv10023078m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 9.3e-99 365.2 519 40.3
ClCG03G002340 Citrullus lanatus HOM05D003203 ORTHO05D003526 6.1e-98 362.5 225 78.2
Hund28195 Selenicereus undatus HOM05D003203 ORTHO05D003526 4.3e-96 356.3 253 71.1
Hund28197 Selenicereus undatus HOM05D003203 ORTHO05D003526 4.3e-96 356.3 253 71.1
AagrBONN_evm.TU.Sc2ySwM_117.4029 Anthoceros agrestis HOM05D003203 ORTHO05D003526 7.4e-96 355.5 302 55.6
Cpa.g.sc139.65 Carica papaya HOM05D003203 ORTHO05D003526 3.0e-89 333.6 252 68.3
Cpa.g.sc139.68 Carica papaya HOM05D003203 ORTHO05D003526 4.4e-88 329.7 259 61.4
AagrBONN_evm.TU.Sc2ySwM_246.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.7e-87 327.8 286 54.9
AagrBONN_evm.TU.Sc2ySwM_245.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-86 323.2 284 54.6
AagrBONN_evm.TU.Sc2ySwM_341.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.1e-86 323.2 284 54.6
HPP92_010123 Vanilla planifolia HOM05D002295 ORTHO05D002789 6.9e-86 322.4 264 56.8
PGSC0003DMG400027376 Solanum tuberosum HOM05D003203 ORTHO05D003526 2.5e-83 313.9 239 59.4
AagrBONN_evm.TU.Sc2ySwM_117.4034 Anthoceros agrestis HOM05D003203 ORTHO05D003526 8.0e-82 308.9 284 53.2
Solyc11g072430.3 Solanum lycopersicum HOM05D003203 ORTHO05D003526 1.2e-77 295.0 191 76.4
Nitab4.5_0001802g0120 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.0e-77 294.3 228 58.8
CAN.G352.39 Capsicum annuum HOM05D003203 ORTHO05D003526 2.7e-74 283.9 220 57.7
HPP92_010182 Vanilla planifolia HOM05D003203 ORTHO05D003526 1.4e-73 281.6 188 70.7
Nn2g13009 Nelumbo nucifera HOM05D003203 ORTHO05D003526 4.2e-67 260.0 156 81.4
Lj2A1035T51 Lonicera japonica HOM05D003203 ORTHO05D003526 6.3e-63 246.1 184 64.1
Actinidia15612 Actinidia chinensis HOM05D003203 ORTHO05D003526 2.8e-58 230.7 179 62.0
BcaC07g41967 Brassica carinata HOM05D003203 ORTHO05D003526 1.8e-57 228.0 276 43.5
PSO339G3960 Papaver somniferum HOM05D003203 ORTHO05D003526 3.0e-57 227.3 185 62.7
PSO765G0134 Papaver somniferum HOM05D003203 ORTHO05D003526 3.8e-52 210.3 158 67.7
FAN21G1129 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.6e-50 204.9 185 53.5
Sp1g06590 Schrenkiella parvula HOM05D003203 ORTHO05D003526 1.8e-49 201.4 188 51.1
FAN17G1794 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.5e-48 198.4 160 58.8
Dinv24671 Davidia involucrata HOM05D003203 ORTHO05D003526 7.0e-46 189.5 136 62.5
COL.COLO4_32909 Corchorus olitorius HOM05D003203 ORTHO05D003526 1.2e-42 178.7 115 73.0
SpUn0840_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 1.4e-41 175.3 322 34.2
Hma1.2p1_0559F.1_g178620 Hydrangea macrophylla HOM05D003203 ORTHO05D003526 2.0e-40 171.4 131 61.1
SHI27633 Sapria himalayana HOM05D003203 ORTHO05D003526 4.6e-37 160.2 127 55.9
Sp3g30710 Schrenkiella parvula HOM05D003203 ORTHO05D003526 8.9e-33 146.0 117 57.3
Lsat_1_v5_gn_2_120 Lactuca sativa HOM05D003203 ORTHO05D003526 9.9e-32 142.5 80 83.8
Lj2A1035T52 Lonicera japonica HOM05D003203 ORTHO05D003526 9.9e-32 142.5 94 66.0
TWI75G1314 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 1.7e-31 141.7 134 58.2
CARHR204760 Cardamine hirsuta HOM05D003203 ORTHO05D003526 7.8e-29 132.9 164 41.5
Cc04_g16280 Coffea canephora HOM05D003203 ORTHO05D003526 1.5e-24 118.6 153 43.1
Gohir.A03G109301 Gossypium hirsutum HOM05D003203 ORTHO05D003526 1.6e-18 98.6 57 80.7
Lsat_1_v5_gn_4_85140 Lactuca sativa HOM05D003203 ORTHO05D003526 2.8e-18 97.8 54 85.2
Gohir.A08G106700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 8.1e-18 96.3 57 80.7
HPP92_010183 Vanilla planifolia HOM05D003203 ORTHO05D003526 5.3e-17 93.6 51 86.3
SHI27628 Sapria himalayana HOM05D003203 ORTHO05D003526 3.2e-14 84.3 53 69.8
CDE07G0291 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 1.4e-09 68.9 39 82.1
RcHm_v2.0_Chr3g0490601 Rosa chinensis HOM05D003203 ORTHO05D003526 2.0e-08 65.1 72 50.0


User provided reference genes

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