Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy1G00997 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.6e-144 515.4 263 100.0
Aqoxy1G00994 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.6e-122 443.0 230 95.2
Cfa016252 Carpinus fangiana HOM05D003934 ORTHO05D005108 8.5e-111 404.1 375 59.7
Nitab4.5_0007081g0020 Nicotiana tabacum HOM05D003934 ORTHO05D005108 1.6e-109 399.8 387 56.3
ClCG05G008860 Citrullus lanatus HOM05D003934 ORTHO05D005108 2.7e-109 399.1 374 60.2
vmacro06541 Vaccinium macrocarpon HOM05D003934 ORTHO05D005108 2.3e-108 396.0 427 52.5
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 4.5e-104 381.7 431 52.7
FAN10G3094 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.7e-104 380.9 441 49.4
Ah.07g205840 Amaranthus hybridus HOM05D003934 ORTHO05D005108 8.5e-103 377.5 406 51.2
SalBow4G2493 Salvia bowleyana HOM05D003934 ORTHO05D005108 1.6e-101 373.2 351 57.5
SalBow4G2054 Salvia bowleyana HOM05D003934 ORTHO05D005108 4.6e-101 371.7 351 57.5
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 4.6e-101 371.7 510 44.5
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 6.7e-100 367.9 510 43.9
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 6.7e-100 367.9 510 45.7
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 5.7e-99 364.8 483 45.1
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 5.7e-99 364.8 510 45.9
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 3.7e-98 362.1 510 43.5
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 3.7e-98 362.1 510 45.9
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 4.8e-98 361.7 510 43.7
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 1.8e-97 359.8 508 43.7
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 3.1e-97 359.0 510 45.3
Haze_00188 Corylus avellana HOM05D003934 ORTHO05D005108 5.3e-97 358.2 494 45.3
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 6.9e-97 357.8 510 44.9
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 1.5e-96 356.7 510 42.7
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 4.5e-96 355.1 509 44.6
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 4.5e-96 355.1 510 44.5
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.7e-96 354.4 510 42.7
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.7e-96 354.4 510 42.7
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.7e-96 354.4 510 42.7
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 7.7e-96 354.4 510 44.5
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 1.7e-95 353.2 511 44.6
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 1.7e-95 353.2 510 44.3
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 1.7e-95 353.2 510 44.3
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 2.9e-95 352.4 511 42.9
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 2.9e-95 352.4 510 44.5
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 8.5e-95 350.9 510 44.5
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 1.1e-94 350.5 513 44.6
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 1.9e-94 349.7 506 43.3
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 1.9e-94 349.7 513 44.4
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 2.5e-94 349.4 510 43.9
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 3.2e-94 349.0 510 44.3
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 4.2e-94 348.6 509 44.4
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 4.2e-94 348.6 511 43.8
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 7.2e-94 347.8 511 44.4
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 7.2e-94 347.8 510 43.5
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 1.2e-93 347.1 511 44.2
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 1.2e-93 347.1 514 43.6
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 1.2e-93 347.1 510 43.9
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 4.7e-93 345.1 510 43.7
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 4.7e-93 345.1 510 43.9
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 4.7e-93 345.1 510 43.7
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 4.7e-93 345.1 509 44.0
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 6.1e-93 344.7 510 43.7
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 6.1e-93 344.7 510 43.9
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 7.9e-93 344.4 513 44.1
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 7.9e-93 344.4 510 43.7
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 1.0e-92 344.0 526 42.6
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 1.8e-92 343.2 507 43.6
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 3.0e-92 342.4 512 41.4
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 3.0e-92 342.4 510 43.5
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 3.0e-92 342.4 510 43.9
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 3.9e-92 342.0 510 41.8
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 5.2e-92 341.7 505 41.6
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 6.7e-92 341.3 512 43.4
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 6.7e-92 341.3 510 43.3
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 8.8e-92 340.9 509 42.8
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 8.8e-92 340.9 510 43.7
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 1.5e-91 340.1 510 43.5
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 2.0e-91 339.7 512 43.6
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 5.7e-91 338.2 507 43.0
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.7e-90 336.7 510 43.1
Oeu041318.2 Olea europaea HOM05D003934 ORTHO05D005108 1.7e-90 336.7 418 50.2
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 1.7e-90 336.7 512 41.0
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 2.2e-90 336.3 510 43.3
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 2.8e-90 335.9 510 43.1
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 3.7e-90 335.5 510 41.2
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 4.8e-90 335.1 510 43.1
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 6.3e-90 334.7 511 43.1
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 8.2e-90 334.3 510 43.1
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 8.2e-90 334.3 510 42.7
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.4e-89 333.6 510 42.7
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 1.8e-89 333.2 559 39.4
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 2.4e-89 332.8 509 41.7
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 2.4e-89 332.8 505 41.2
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.1e-89 332.4 515 40.6
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 3.1e-89 332.4 504 41.7
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 7.7e-88 327.8 508 40.6
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 5.0e-87 325.1 350 50.0
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.0e-87 325.1 513 40.4
MBI07_g07099_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 1.9e-86 323.2 170 88.8
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 4.2e-86 322.0 510 40.6
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 9.4e-86 320.9 507 40.6
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 4.0e-84 315.5 483 43.7
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 3.3e-83 312.4 472 43.4
DCAR_026768 Daucus carota HOM05D003934 ORTHO05D005108 9.7e-83 310.8 256 62.1
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.2e-82 309.7 579 36.3
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 2.2e-82 309.7 517 38.9
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 1.4e-81 307.0 512 40.2
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 5.3e-81 305.1 473 43.3
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 1.2e-80 303.9 507 40.6
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 1.2e-80 303.9 507 40.6
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 1.6e-80 303.5 507 40.4
ATR0602G148 Amborella trichopoda HOM05D003934 ORTHO05D005108 4.5e-80 302.0 170 88.2
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 1.0e-79 300.8 512 40.0
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 1.7e-79 300.1 512 40.2
DCAR_009017 Daucus carota HOM05D003934 ORTHO05D005108 3.8e-79 298.9 174 83.3
PSO782G1765 Papaver somniferum HOM05D003934 ORTHO05D005108 1.5e-78 297.0 441 40.8
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 8.0e-77 291.2 170 86.5
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 2.3e-76 289.7 231 67.1
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 6.8e-76 288.1 506 39.1
FvH4_5g28470 Fragaria vesca HOM05D003934 ORTHO05D005108 4.1e-73 278.9 192 71.4
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 5.4e-73 278.5 134 91.0
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 7.0e-73 278.1 170 82.4
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 3.5e-72 275.8 513 36.8
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 2.3e-71 273.1 511 36.2
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 6.5e-71 271.6 515 35.9
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 1.9e-70 270.0 511 36.0
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.5e-70 268.5 479 38.4
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 2.1e-69 266.5 513 36.1
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.8e-69 266.2 407 42.5
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 3.6e-69 265.8 493 37.7
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 6.1e-69 265.0 489 37.8
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.0e-68 262.7 493 36.9
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 6.8e-68 261.5 215 68.8
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 5.9e-64 248.4 462 37.0
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 6.6e-55 218.4 174 60.3
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 6.6e-55 218.4 505 33.1
Cre06.g297750 Chlamydomonas reinhardtii HOM05D003934 ORTHO05D005108 1.1e-54 217.6 171 62.0
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.1e-53 213.4 178 55.6
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.8e-53 213.0 141 72.3
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.9e-50 203.0 181 54.7
Haze_26996 Corylus avellana HOM05D003934 ORTHO05D005108 6.8e-44 181.8 170 55.3
BolC6t37330H Brassica oleracea HOM05D003934 ORTHO05D019879 1.2e-43 181.0 277 43.7
BcaC08g44628 Brassica carinata HOM05D003934 ORTHO05D019879 2.0e-43 180.3 276 43.5
C06p21480 Brassica napus HOM05D003934 ORTHO05D019879 2.0e-43 180.3 276 43.5
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 7.5e-43 178.3 129 68.2
Aqoxy2G03740 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 9.9e-43 177.9 124 64.5
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 9.9e-43 177.9 534 28.7
BraA07t29851Z Brassica rapa HOM05D003934 ORTHO05D019879 1.3e-42 177.6 268 44.4
PRCOL_00004948 Prasinoderma coloniale HOM05D003934 ORTHO05D005108 1.3e-42 177.6 179 51.4
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 1.3e-39 167.5 173 48.6
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 5.2e-36 155.6 155 51.0
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.5e-35 154.1 399 31.8
MBI07_g07098_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 5.8e-35 152.1 97 79.4
SEGI_13646 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.9e-33 147.1 96 76.0
TPR.G17291 Trifolium pratense HOM05D003934 ORTHO05D005108 5.4e-33 145.6 127 60.6
Gorai.007G258600 Gossypium raimondii HOM05D003934 ORTHO05D005108 2.7e-32 143.3 96 74.0
Sc25g0000870 Simmondsia chinensis HOM05D003934 ORTHO05D005108 3.5e-32 142.9 96 76.0
A07p21690 Brassica napus HOM05D003934 ORTHO05D019879 1.0e-31 141.4 237 42.2
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 1.1e-30 137.9 527 28.3
SEGI_10754 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 2.1e-29 133.7 96 70.8
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.6e-29 132.9 169 49.1
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.7e-29 132.5 169 49.1
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.4e-28 131.0 169 48.5
AUR62031016 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.5e-27 127.5 109 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1804 Anthoceros agrestis HOM05D003934 ORTHO05D005108 2.2e-26 123.6 96 61.5
BcaB02g07780 Brassica carinata HOM05D003934 ORTHO05D019879 1.2e-19 101.3 137 45.3
Aqoxy1G01000 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.0e-19 100.5 65 72.3
FAN07G2332 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.7e-13 79.7 119 45.4
HanXRQChr09g0252591 Helianthus annuus HOM05D003934 ORTHO05D019879 1.4e-12 77.8 50 72.0
Hma1.2p1_1973F.1_g309600 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 1.8e-12 77.4 36 91.7
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 2.0e-11 73.9 141 38.3
FAN07G1716 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.9e-10 69.3 36 88.9


User provided reference genes

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