Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.07g205840 Amaranthus hybridus HOM05D003934 ORTHO05D005108 1.6e-233 812.4 406 100.0
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 8.3e-190 667.2 507 69.8
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 5.4e-189 664.5 510 70.2
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.8e-187 658.3 515 69.3
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 6.1e-185 651.0 579 62.7
vmacro06541 Vaccinium macrocarpon HOM05D003934 ORTHO05D005108 3.7e-182 641.7 427 74.7
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 5.4e-173 611.3 510 63.1
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 2.0e-172 609.4 510 62.5
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 2.7e-172 609.0 510 63.1
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 3.0e-171 605.5 510 63.1
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 3.6e-169 598.6 512 61.9
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 8.0e-169 597.4 510 62.2
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 1.4e-168 596.7 509 62.7
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 1.4e-168 596.7 511 62.4
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 4.0e-168 595.1 483 64.2
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 4.4e-167 591.7 510 61.6
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 9.8e-167 590.5 510 61.4
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.7e-166 589.7 510 61.4
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.7e-166 589.7 510 61.4
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.2e-166 589.3 510 61.4
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 2.9e-166 589.0 510 61.6
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 3.7e-166 588.6 510 61.8
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 1.4e-165 586.6 510 61.4
Nitab4.5_0007081g0020 Nicotiana tabacum HOM05D003934 ORTHO05D005108 1.9e-165 586.3 410 72.7
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 2.4e-165 585.9 510 61.0
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 3.2e-165 585.5 510 60.6
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 4.1e-165 585.1 511 61.1
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 5.4e-165 584.7 510 61.2
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 1.6e-164 583.2 510 61.6
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 4.6e-164 581.6 510 61.0
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 7.8e-164 580.9 511 61.4
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 1.0e-163 580.5 512 59.8
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 3.0e-163 578.9 512 60.2
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 5.0e-163 578.2 510 59.8
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 8.6e-163 577.4 510 60.8
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 8.6e-163 577.4 516 60.3
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 1.1e-162 577.0 510 61.0
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 1.5e-162 576.6 510 60.8
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.9e-162 576.2 510 60.8
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 2.5e-162 575.9 510 60.8
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 4.3e-162 575.1 510 60.2
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 7.3e-162 574.3 510 60.6
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 7.3e-162 574.3 510 60.6
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 7.3e-162 574.3 511 60.7
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 1.2e-161 573.5 512 60.2
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 1.2e-161 573.5 510 60.6
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 2.1e-161 572.8 511 60.5
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 2.1e-161 572.8 511 60.5
Cfa016252 Carpinus fangiana HOM05D003934 ORTHO05D005108 2.1e-161 572.8 406 71.4
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 4.7e-161 571.6 504 60.3
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 4.7e-161 571.6 511 60.3
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 6.2e-161 571.2 509 59.1
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 6.2e-161 571.2 510 59.6
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 8.1e-161 570.9 510 60.2
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 1.8e-160 569.7 511 60.3
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 2.3e-160 569.3 505 59.2
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 2.3e-160 569.3 513 59.5
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 2.3e-160 569.3 510 60.0
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 4.0e-160 568.5 510 59.4
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 4.0e-160 568.5 510 59.8
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 5.2e-160 568.2 511 60.1
FAN10G3094 Fragaria x ananassa HOM05D003934 ORTHO05D005108 6.8e-160 567.8 441 66.7
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 8.9e-160 567.4 510 59.6
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 1.5e-159 566.6 510 59.6
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 2.0e-159 566.2 510 59.4
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 2.0e-159 566.2 510 58.8
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 4.4e-159 565.1 510 59.2
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 7.5e-159 564.3 510 60.2
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 1.7e-158 563.1 510 60.0
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 8.3e-158 560.8 512 59.8
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 3.2e-157 558.9 510 58.2
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 4.1e-157 558.5 510 57.5
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 1.2e-156 557.0 508 57.1
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 4.6e-156 555.1 510 59.4
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 5.1e-155 551.6 559 54.6
ClCG05G008860 Citrullus lanatus HOM05D003934 ORTHO05D005108 1.9e-154 549.7 406 69.7
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 4.3e-154 548.5 510 59.0
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 9.5e-154 547.4 514 57.2
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 1.2e-153 547.0 455 62.2
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 1.6e-153 546.6 510 56.1
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 2.8e-153 545.8 518 57.3
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 4.7e-153 545.0 514 57.2
Haze_00188 Corylus avellana HOM05D003934 ORTHO05D005108 1.5e-151 540.0 494 59.9
Oeu041318.2 Olea europaea HOM05D003934 ORTHO05D005108 2.2e-150 536.2 418 66.5
SalBow4G2493 Salvia bowleyana HOM05D003934 ORTHO05D005108 1.4e-149 533.5 408 66.9
SalBow4G2054 Salvia bowleyana HOM05D003934 ORTHO05D005108 4.1e-149 531.9 408 66.9
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 5.4e-149 531.6 527 55.6
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 9.2e-149 530.8 507 57.0
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.9e-147 525.4 517 56.5
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.6e-145 520.0 511 54.8
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 1.6e-145 520.0 512 55.5
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 1.1e-144 517.3 488 58.6
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 2.0e-143 513.1 509 54.6
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 4.4e-143 511.9 509 54.6
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 1.7e-142 510.0 509 54.2
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 3.8e-142 508.8 509 54.4
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 3.0e-139 499.2 512 53.9
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 8.1e-137 491.1 476 57.1
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 4.0e-136 488.8 511 52.4
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 1.2e-135 487.3 510 53.5
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 3.4e-135 485.7 511 52.1
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 7.6e-135 484.6 513 52.6
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 9.9e-135 484.2 511 53.4
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 2.2e-134 483.0 515 52.0
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 5.4e-133 478.4 513 52.2
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 7.4e-130 468.0 512 50.8
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 2.8e-129 466.1 512 50.8
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 3.4e-127 459.1 505 52.7
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.2e-124 450.7 491 54.0
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.6e-124 450.3 505 52.1
PSO782G1765 Papaver somniferum HOM05D003934 ORTHO05D005108 1.6e-124 450.3 470 53.4
FvH4_5g28470 Fragaria vesca HOM05D003934 ORTHO05D005108 7.9e-124 448.0 431 57.3
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.5e-122 443.0 505 51.7
MBI07_g07099_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 8.7e-115 417.9 302 69.5
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 4.3e-114 415.6 550 45.5
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 1.6e-113 413.7 787 36.0
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.0e-110 404.4 408 54.9
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 6.1e-108 395.2 542 46.1
Aqoxy1G00997 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.9e-101 373.6 406 51.2
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 2.0e-98 363.6 326 60.7
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 1.8e-96 357.1 407 48.4
Cre06.g297750 Chlamydomonas reinhardtii HOM05D003934 ORTHO05D005108 3.1e-96 356.3 553 40.5
Sc25g0000870 Simmondsia chinensis HOM05D003934 ORTHO05D005108 3.1e-96 356.3 368 57.6
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 4.5e-87 325.9 412 45.9
Aqoxy1G00994 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.7e-86 323.9 373 48.8
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 5.0e-86 322.4 536 42.2
DCAR_026768 Daucus carota HOM05D003934 ORTHO05D005108 3.2e-85 319.7 203 73.9
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 3.2e-85 319.7 509 39.9
Gorai.007G258600 Gossypium raimondii HOM05D003934 ORTHO05D005108 5.5e-85 318.9 369 51.2
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.3e-83 313.5 419 47.5
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 4.0e-83 312.8 357 52.1
DCAR_009017 Daucus carota HOM05D003934 ORTHO05D005108 1.5e-77 294.3 183 76.5
ATR0602G148 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.8e-75 287.3 182 74.2
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 9.8e-74 281.6 141 87.9
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.8e-73 279.3 429 43.1
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.1e-72 278.1 475 40.4
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 5.4e-72 275.8 251 56.6
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.7e-71 273.5 327 50.2
TPR.G17291 Trifolium pratense HOM05D003934 ORTHO05D005108 6.6e-62 242.3 290 49.3
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 6.1e-60 235.7 423 40.7
Haze_26996 Corylus avellana HOM05D003934 ORTHO05D005108 4.4e-58 229.6 550 30.4
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 3.7e-57 226.5 514 34.4
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 6.4e-57 225.7 464 35.6
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 9.2e-56 221.9 363 41.6
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 6.6e-54 215.7 458 35.4
MBI07_g07098_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 1.1e-51 208.4 132 77.3
PRCOL_00004948 Prasinoderma coloniale HOM05D003934 ORTHO05D005108 1.2e-50 204.9 255 47.1
AagrBONN_evm.TU.Sc2ySwM_368.1804 Anthoceros agrestis HOM05D003934 ORTHO05D005108 6.4e-49 199.1 292 40.8
SEGI_10754 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 4.7e-44 183.0 131 68.7
Aqoxy2G03740 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.6e-42 177.2 124 65.3
BcaC08g44628 Brassica carinata HOM05D003934 ORTHO05D019879 1.2e-39 168.3 384 34.1
C06p21480 Brassica napus HOM05D003934 ORTHO05D019879 1.2e-39 168.3 384 34.1
BolC6t37330H Brassica oleracea HOM05D003934 ORTHO05D019879 6.0e-39 166.0 384 33.9
BraA07t29851Z Brassica rapa HOM05D003934 ORTHO05D019879 1.7e-38 164.5 385 33.5
SEGI_13646 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.8e-35 154.5 98 77.6
A07p21690 Brassica napus HOM05D003934 ORTHO05D019879 3.4e-26 123.6 346 31.8
AUR62031016 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.4e-26 123.2 110 59.1
Aqoxy1G01000 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.1e-19 102.1 74 64.9
Sp5g08830 Schrenkiella parvula HOM05D003934 ORTHO05D005108 5.4e-16 89.7 229 34.9
BcaB02g07780 Brassica carinata HOM05D003934 ORTHO05D019879 7.1e-16 89.4 132 41.7
Hma1.2p1_1973F.1_g309600 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 2.8e-12 77.4 50 66.0
SEGI_13482 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 3.7e-12 77.0 130 36.9
HanXRQChr09g0252591 Helianthus annuus HOM05D003934 ORTHO05D019879 1.1e-11 75.5 50 66.0
FAN07G1716 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.4e-11 74.3 37 91.9
FAN07G2332 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.4e-11 74.3 119 41.2
Gorai.005G191100 Gossypium raimondii HOM05D003934 ORTHO05D005108 8.7e-06 55.8 42 61.9


User provided reference genes

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