Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia20120 Actinidia chinensis HOM05D006414 ORTHO05D007780 1.6e-120 436.4 279 100.0
Actinidia16042 Actinidia chinensis HOM05D006414 ORTHO05D007780 1.3e-77 293.9 238 67.2
Dinv19510 Davidia involucrata HOM05D006414 ORTHO05D007780 9.1e-55 218.0 243 53.1
Gohir.D10G102200 Gossypium hirsutum HOM05D006414 ORTHO05D007780 1.2e-54 217.6 249 51.0
SalBow8G0663 Salvia bowleyana HOM05D000608 ORTHO05D007780 2.0e-46 190.3 257 46.7
vmacro18623 Vaccinium macrocarpon HOM05D006414 ORTHO05D007780 2.7e-46 189.9 198 53.5
SalBow8G2565 Salvia bowleyana HOM05D000608 ORTHO05D007780 3.5e-46 189.5 242 46.7
EL10Ac6g14730 Beta vulgaris HOM05D006414 ORTHO05D007780 1.0e-45 188.0 199 51.8
SalBow6G2882 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.0e-45 188.0 244 47.1
SalBow6G7209 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.0e-45 188.0 244 47.1
Rhsim05G0180100 Rhododendron simsii HOM05D006414 ORTHO05D007780 8.6e-45 184.9 201 52.7
MD03G1187700 Malus domestica HOM05D006414 ORTHO05D007780 4.2e-44 182.6 177 53.1
Prupe.4G236100 Prunus persica HOM05D006414 ORTHO05D007780 4.2e-44 182.6 207 48.8
Nitab4.5_0000156g0020 Nicotiana tabacum HOM05D006414 ORTHO05D007780 5.5e-44 182.2 157 59.9
TAR376G1012 Trochodendron aralioides HOM05D006414 ORTHO05D007780 7.2e-44 181.8 193 51.8
GSVIVG01022204001 Vitis vinifera HOM05D006414 ORTHO05D007780 7.2e-44 181.8 195 52.8
Cc07_g15860 Coffea canephora HOM05D006414 ORTHO05D007780 2.8e-43 179.9 249 46.6
Haze_14271 Corylus avellana HOM05D006414 ORTHO05D007780 2.8e-43 179.9 204 50.0
Sc03g0004230 Simmondsia chinensis HOM05D006414 ORTHO05D007780 3.6e-43 179.5 199 49.7
MSTRG.2541 Avicennia marina HOM05D006414 ORTHO05D007780 6.1e-43 178.7 180 54.4
Duzib147G0014 Durio zibethinus HOM05D006414 ORTHO05D007780 8.0e-43 178.3 197 51.3
AUR62003321 Chenopodium quinoa HOM05D006414 ORTHO05D007780 1.8e-42 177.2 149 59.7
AUR62016261 Chenopodium quinoa HOM05D006414 ORTHO05D007780 1.8e-42 177.2 149 59.7
AUR62043752 Chenopodium quinoa HOM05D006414 ORTHO05D007780 1.8e-42 177.2 149 59.7
CsaV3_6G045830 Cucumis sativus L. HOM05D006414 ORTHO05D007780 1.8e-42 177.2 189 50.3
PGR004G0335 Punica granatum HOM05D006414 ORTHO05D007780 1.8e-42 177.2 216 47.2
Solyc04g054270.4 Solanum lycopersicum HOM05D006414 ORTHO05D007780 1.8e-42 177.2 159 58.5
Sopen04g023860 Solanum pennellii HOM05D006414 ORTHO05D007780 1.8e-42 177.2 159 58.5
Thecc.01G110400 Theobroma cacao HOM05D006414 ORTHO05D007780 2.3e-42 176.8 238 46.6
Ah.03g149270 Amaranthus hybridus HOM05D006414 ORTHO05D007780 3.0e-42 176.4 150 58.0
PGSC0003DMG400012802 Solanum tuberosum HOM05D006414 ORTHO05D007780 3.0e-42 176.4 159 57.9
TWI74G0679 Tripterygium wilfordii HOM05D006414 ORTHO05D007780 3.0e-42 176.4 189 52.9
Atru.chr4.307 Acer truncatum HOM05D006414 ORTHO05D007780 4.0e-42 176.0 251 44.2
HanXRQChr07g0202341 Helianthus annuus HOM05D006414 ORTHO05D007780 5.2e-42 175.6 197 51.3
Peaxi162Scf01651g00012 Petunia axillaris HOM05D006414 ORTHO05D007780 6.8e-42 175.3 190 52.1
Aqoxy6G00504 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 1.2e-41 174.5 226 47.3
ClCG01G019140 Citrullus lanatus HOM05D006414 ORTHO05D007780 1.2e-41 174.5 227 45.4
Potri.005G082400 Populus trichocarpa HOM05D006414 ORTHO05D007780 1.2e-41 174.5 149 57.0
SalBow6G5148 Salvia bowleyana HOM05D006414 ORTHO05D007780 1.5e-41 174.1 239 45.2
Lj2A560T64 Lonicera japonica HOM05D006414 ORTHO05D007780 2.6e-41 173.3 204 49.5
CiPaw.04G093800 Carya illinoinensis HOM05D006414 ORTHO05D007780 3.4e-41 172.9 246 45.5
Migut.H02413 Erythranthe guttata HOM05D006414 ORTHO05D007780 3.4e-41 172.9 250 44.4
Eucgr.L02634 Eucalyptus grandis HOM05D006414 ORTHO05D007780 3.4e-41 172.9 199 48.2
Sabra05G0067400 Salix brachista HOM05D006414 ORTHO05D007780 3.4e-41 172.9 194 49.0
MELO3C007791.2 Cucumis melo HOM05D006414 ORTHO05D007780 4.4e-41 172.6 188 50.0
QL06p032569 Quercus lobata HOM05D006414 ORTHO05D007780 4.4e-41 172.6 162 60.5
RcHm_v2.0_Chr4g0409671 Rosa chinensis HOM05D006414 ORTHO05D007780 4.4e-41 172.6 158 56.3
Ciclev10025440m.g Citrus clementina HOM05D006414 ORTHO05D007780 5.7e-41 172.2 200 49.0
ECA238G3570 Erigeron canadensis HOM05D006414 ORTHO05D007780 5.7e-41 172.2 141 61.0
FvH4_4g12030 Fragaria vesca HOM05D006414 ORTHO05D007780 1.7e-40 170.6 151 55.6
Lj4g0018166 Lotus japonicus HOM05D006414 ORTHO05D007780 2.8e-40 169.9 229 44.5
Sed0012904 Sechium edule HOM05D006414 ORTHO05D007780 2.8e-40 169.9 224 46.9
Rhsim08G0008000 Rhododendron simsii HOM05D006414 ORTHO05D007780 3.7e-40 169.5 207 49.3
HPP92_016845 Vanilla planifolia HOM05D006414 ORTHO05D007780 3.7e-40 169.5 217 48.8
Oeu028531.1 Olea europaea HOM05D006414 ORTHO05D007780 4.9e-40 169.1 136 59.6
CSS0011059 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 6.3e-40 168.7 190 51.1
CSS0026013 Camellia sinensis var. sinensis HOM05D006414 ORTHO05D007780 6.3e-40 168.7 190 51.1
CAN.G382.6 Capsicum annuum HOM05D006414 ORTHO05D007780 1.4e-39 167.5 148 56.8
Psat7g051760 Pisum sativum HOM05D006414 ORTHO05D007780 1.4e-39 167.5 205 48.3
Lsat_1_v5_gn_2_117881 Lactuca sativa HOM05D006414 ORTHO05D007780 1.8e-39 167.2 148 57.4
SGA_v2.0_scaffold2G01307 Striga asiatica HOM05D006414 ORTHO05D007780 1.8e-39 167.2 174 49.4
THA.LOC104807720 Tarenaya hassleriana HOM05D006414 ORTHO05D007780 5.4e-39 165.6 155 54.8
Gorai.011G111900 Gossypium raimondii HOM05D006414 ORTHO05D007780 1.2e-38 164.5 190 50.0
DCAR_000987 Daucus carota HOM05D006414 ORTHO05D007780 2.0e-38 163.7 143 58.0
FAN07G2537 Fragaria x ananassa HOM05D006414 ORTHO05D007780 2.0e-38 163.7 164 51.8
FAN12G1220 Fragaria x ananassa HOM05D006414 ORTHO05D007780 2.0e-38 163.7 164 51.8
FAN12G2815 Fragaria x ananassa HOM05D006414 ORTHO05D007780 2.0e-38 163.7 164 51.8
Glyma.05G182700 Glycine max HOM05D006414 ORTHO05D007780 2.0e-38 163.7 230 47.8
Gohir.A10G086500 Gossypium hirsutum HOM05D006414 ORTHO05D007780 2.0e-38 163.7 235 45.1
unitig_28.g29440 Utricularia gibba HOM05D006414 ORTHO05D007780 2.7e-38 163.3 163 52.8
AL7G11770 Arabidopsis lyrata HOM05D006414 ORTHO05D007780 4.5e-38 162.5 194 49.0
Carub.0007s0149 Capsella rubella HOM05D006414 ORTHO05D007780 5.9e-38 162.2 195 49.7
Medtr8g091670 Medicago truncatula HOM05D006414 ORTHO05D007780 5.9e-38 162.2 111 71.2
Ca_17703_v3 Cicer arietinum L. HOM05D006414 ORTHO05D007780 7.8e-38 161.8 100 76.0
Lalb_Chr07g0184891 Lupinus albus HOM05D006414 ORTHO05D007780 7.8e-38 161.8 193 48.2
Cpa.g.sc2736.1 Carica papaya HOM05D006414 ORTHO05D007780 2.9e-37 159.8 229 43.7
Sp7g36270 Schrenkiella parvula HOM05D006414 ORTHO05D007780 5.0e-37 159.1 150 56.7
Thhalv10024997m.g Eutrema salsugineum HOM05D006414 ORTHO05D007780 6.6e-37 158.7 159 54.1
TPR.G2171 Trifolium pratense HOM05D006414 ORTHO05D007780 6.6e-37 158.7 118 68.6
ATR0681G202 Amborella trichopoda HOM05D006414 ORTHO05D007780 8.6e-37 158.3 199 44.2
A01p00510 Brassica napus HOM05D006414 ORTHO05D007780 8.6e-37 158.3 155 56.1
BcaNung00882 Brassica carinata HOM05D006414 ORTHO05D007780 1.1e-36 157.9 155 56.1
BcaNung06694 Brassica carinata HOM05D006414 ORTHO05D007780 1.1e-36 157.9 155 56.1
C01p00660 Brassica napus HOM05D006414 ORTHO05D007780 1.1e-36 157.9 155 56.1
CARHR247110 Cardamine hirsuta HOM05D006414 ORTHO05D007780 3.3e-36 156.4 150 54.7
Aa31LG6G15650 Aethionema arabicum HOM05D006414 ORTHO05D007780 4.3e-36 156.0 161 50.9
Glyma.08G140300 Glycine max HOM05D006414 ORTHO05D007780 5.6e-36 155.6 186 47.8
AT4G39620 Arabidopsis thaliana HOM05D006414 ORTHO05D007780 9.5e-36 154.8 194 47.4
Eucgr.I00342 Eucalyptus grandis HOM05D006414 ORTHO05D007780 1.6e-35 154.1 168 50.0
arahy.Tifrunner.gnm1.ann1.BPVH0U Arachis hypogaea HOM05D006414 ORTHO05D007780 3.6e-35 152.9 154 51.3
Phvul.002G263600 Phaseolus vulgaris HOM05D006414 ORTHO05D007780 3.6e-35 152.9 100 69.0
BraA01t00058Z Brassica rapa HOM05D006414 ORTHO05D007780 5.2e-34 149.1 168 51.8
CDE10G0169 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 5.2e-34 149.1 134 53.0
arahy.Tifrunner.gnm1.ann1.S4ITMM Arachis hypogaea HOM05D006414 ORTHO05D007780 6.8e-34 148.7 149 51.7
arahy.Tifrunner.gnm1.ann1.N3YXA0 Arachis hypogaea HOM05D006414 ORTHO05D007780 1.5e-33 147.5 149 51.7
arahy.Tifrunner.gnm1.ann1.F90T56 Arachis hypogaea HOM05D006414 ORTHO05D007780 4.4e-33 146.0 149 51.0
Zm00001eb194340 Zea mays HOM05D006414 ORTHO05D007780 1.0e-29 134.8 121 56.2
PSO215G0001 Papaver somniferum HOM05D006414 ORTHO05D007780 6.2e-27 125.6 146 47.9
Nitab4.5_0002133g0010 Nicotiana tabacum HOM05D006414 ORTHO05D007780 1.1e-23 114.8 150 46.0
COL.COLO4_11035 Corchorus olitorius HOM05D006414 ORTHO05D007780 1.2e-22 111.3 134 48.5
SEGI_05645 Sequoiadendron giganteum HOM05D006414 ORTHO05D007780 3.9e-21 106.3 141 39.0
FAN17G1880 Fragaria x ananassa HOM05D006414 ORTHO05D007780 2.1e-19 100.5 151 38.4
Aqoxy5G00981 Aquilegia oxysepala HOM05D006414 ORTHO05D007780 5.8e-17 92.4 139 43.2
Mapoly0079s0007 Marchantia polymorpha HOM05D006414 ORTHO05D007780 1.3e-16 91.3 159 35.8
AagrBONN_evm.TU.Sc2ySwM_117.627 Anthoceros agrestis HOM05D006414 ORTHO05D007780 1.9e-15 87.4 196 29.6
MD11G1203200 Malus domestica HOM05D006414 ORTHO05D007780 1.6e-14 84.3 39 92.3
unitig_27.g25357 Utricularia gibba HOM05D006414 ORTHO05D007780 1.6e-14 84.3 88 51.1
Nn1g05205 Nelumbo nucifera HOM05D006414 ORTHO05D007780 2.1e-14 84.0 88 48.9
Pp3c4_9690 Physcomitrium patens HOM05D006414 ORTHO05D007780 1.7e-13 80.9 111 37.8
VMungo0251G0422 Vigna mungo HOM05D006414 ORTHO05D007780 1.1e-12 78.2 71 53.5
Pp3c8_4580 Physcomitrium patens HOM05D006414 ORTHO05D007780 3.3e-12 76.6 146 32.2
AagrBONN_evm.TU.Sc2ySwM_344.419 Anthoceros agrestis HOM05D006414 ORTHO05D007780 5.6e-12 75.9 148 30.4
CDE10G1362 Ceratophyllum demersum HOM05D006414 ORTHO05D007780 9.5e-12 75.1 72 51.4
Potri.007G084750 Populus trichocarpa HOM05D006414 ORTHO05D007780 1.2e-11 74.7 41 82.9
SMO223G0013 Selaginella moellendorffii HOM05D006414 ORTHO05D007780 1.6e-11 74.3 193 24.9
VMungo0251G3283 Vigna mungo HOM05D006414 ORTHO05D007780 2.8e-11 73.6 34 94.1
Manes.12G140500 Manihot esculenta HOM05D006414 ORTHO05D007780 4.7e-11 72.8 72 51.4
Pp3c4_4900 Physcomitrium patens HOM05D006217 ORTHO05D005119 8.9e-10 68.6 156 26.9
Mapoly0154s0039 Marchantia polymorpha HOM05D004127 ORTHO05D005119 6.4e-08 62.4 145 26.9
AagrBONN_evm.TU.Sc2ySwM_117.1008 Anthoceros agrestis HOM05D006414 ORTHO05D007780 1.9e-07 60.8 97 29.9
CBR_g49306 Chara braunii HOM05D005862 ORTHO05D007780 2.4e-07 60.5 105 28.6
AL3G17380 Arabidopsis lyrata HOM05D001779 ORTHO05D001753 9.2e-07 58.5 158 24.7
AT3G06430 Arabidopsis thaliana HOM05D001779 ORTHO05D001753 9.2e-07 58.5 158 24.7
CARHR080960 Cardamine hirsuta HOM05D001779 ORTHO05D001753 9.2e-07 58.5 158 24.7
EL10Ac3g06265 Beta vulgaris HOM05D001779 ORTHO05D001753 1.2e-06 58.2 158 25.9
Lalb_Chr12g0200631 Lupinus albus HOM05D001779 ORTHO05D001753 1.2e-06 58.2 199 22.6
PSO674G0008 Papaver somniferum HOM05D001779 ORTHO05D001753 1.2e-06 58.2 118 33.1
Carub.0003s0587 Capsella rubella HOM05D001779 ORTHO05D001753 1.6e-06 57.8 158 24.1
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 2.1e-06 57.4 115 25.2
Lalb_Chr07g0181761 Lupinus albus HOM05D001779 ORTHO05D001753 4.6e-06 56.2 158 24.7
SGA_v2.0_scaffold44G16880 Striga asiatica HOM05D005862 ORTHO05D007731 4.6e-06 56.2 127 26.8
AagrBONN_evm.TU.Sc2ySwM_344.2098 Anthoceros agrestis HOM05D005862 ORTHO05D007731 6.0e-06 55.8 171 25.1
Ciclev10004807m.g Citrus clementina HOM05D001779 ORTHO05D001753 6.0e-06 55.8 160 22.5
Haze_00787 Corylus avellana HOM05D000159 ORTHO05D002729 6.0e-06 55.8 158 22.8
QL06p014037 Quercus lobata HOM05D001779 ORTHO05D001753 6.0e-06 55.8 158 22.8
Thhalv10020626m.g Eutrema salsugineum HOM05D001779 ORTHO05D001753 7.8e-06 55.5 158 24.1
Sp3g05350 Schrenkiella parvula HOM05D001779 ORTHO05D001753 7.8e-06 55.5 158 23.4


User provided reference genes

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