Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AagrBONN_evm.TU.Sc2ySwM_344.4913 Anthoceros agrestis HOM05D002336 ORTHO05D002526 3.1e-54 214.9 112 100.0
AagrBONN_evm.TU.Sc2ySwM_344.663 Anthoceros agrestis HOM05D002336 ORTHO05D002526 2.1e-18 95.9 118 45.8
Mapoly0173s0018 Marchantia polymorpha HOM05D002336 ORTHO05D002526 6.1e-18 94.4 114 44.7
Pp3c9_19820 Physcomitrium patens HOM05D002336 ORTHO05D002526 1.4e-17 93.2 118 43.2
PGR102G1725 Punica granatum HOM05D002336 ORTHO05D002526 5.2e-17 91.3 117 48.7
SMO340G0158 Selaginella moellendorffii HOM05D002336 ORTHO05D002526 6.7e-17 90.9 118 44.1
Hund08720 Selenicereus undatus HOM05D002336 ORTHO05D002526 2.0e-16 89.4 114 45.6
AUR62008826 Chenopodium quinoa HOM05D002336 ORTHO05D002526 2.6e-16 89.0 115 46.1
AUR62025415 Chenopodium quinoa HOM05D002336 ORTHO05D002526 2.6e-16 89.0 115 46.1
Ah.15g091530 Amaranthus hybridus HOM05D002336 ORTHO05D002526 4.4e-16 88.2 115 45.2
Sc15g0006500 Simmondsia chinensis HOM05D002336 ORTHO05D002526 4.4e-16 88.2 115 45.2
unitig_699.g19459 Utricularia gibba HOM05D002336 ORTHO05D002526 7.5e-16 87.4 117 45.3
HPP92_022163 Vanilla planifolia HOM05D002336 ORTHO05D002526 7.5e-16 87.4 119 44.5
DCAR_014263 Daucus carota HOM05D002336 ORTHO05D002526 1.3e-15 86.7 112 46.4
Carub.0006s0836 Capsella rubella HOM05D002336 ORTHO05D002526 1.7e-15 86.3 115 46.1
CDE04G0107 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 1.7e-15 86.3 115 46.1
MBI06_g12321_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 2.2e-15 85.9 115 46.1
AL6G20340 Arabidopsis lyrata HOM05D002336 ORTHO05D002526 3.7e-15 85.1 115 44.3
BcaB05g21520 Brassica carinata HOM05D002336 ORTHO05D002526 3.7e-15 85.1 115 44.3
A10p27560 Brassica napus HOM05D002336 ORTHO05D002526 3.7e-15 85.1 117 44.4
C09p67630 Brassica napus HOM05D002336 ORTHO05D002526 3.7e-15 85.1 117 44.4
BolC9t59525H Brassica oleracea HOM05D002336 ORTHO05D002526 3.7e-15 85.1 117 44.4
BraA10t44808Z Brassica rapa HOM05D002336 ORTHO05D002526 3.7e-15 85.1 117 44.4
AT5G09920 Arabidopsis thaliana HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 44.3
BcaB08g37172 Brassica carinata HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
A02p00240 Brassica napus HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
A03p04330 Brassica napus HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
BolC2t06378H Brassica oleracea HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
BraA02t05008Z Brassica rapa HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
BraA03t09777Z Brassica rapa HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
CARHR203410 Cardamine hirsuta HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
Prupe.6G171500 Prunus persica HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 46.1
TWI53G1839 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 4.8e-15 84.7 115 45.2
EL10Ac7g17722 Beta vulgaris HOM05D002336 ORTHO05D002526 6.3e-15 84.3 115 45.2
CsaV3_5G039120 Cucumis sativus L. HOM05D002336 ORTHO05D002526 6.3e-15 84.3 115 46.1
Eucgr.I00318 Eucalyptus grandis HOM05D002336 ORTHO05D002526 6.3e-15 84.3 115 46.1
Lsat_1_v5_gn_2_67161 Lactuca sativa HOM05D002336 ORTHO05D002526 6.3e-15 84.3 117 44.4
Rhsim02G0083000 Rhododendron simsii HOM05D002336 ORTHO05D002526 6.3e-15 84.3 111 44.1
THA.LOC104799288 Tarenaya hassleriana HOM05D002336 ORTHO05D002526 6.3e-15 84.3 115 47.0
A07p02210 Brassica napus HOM05D002336 ORTHO05D002526 8.2e-15 84.0 109 40.4
CANSAT01G2839 Cannabis sativa HOM05D002336 ORTHO05D002526 8.2e-15 84.0 115 45.2
Cc07_g16330 Coffea canephora HOM05D002336 ORTHO05D002526 8.2e-15 84.0 85 50.6
Glyma.05G189100 Glycine max HOM05D002336 ORTHO05D002526 8.2e-15 84.0 115 46.1
Medtr8g011890 Medicago truncatula HOM05D002336 ORTHO05D002526 8.2e-15 84.0 115 42.6
Duzib264G0264 Durio zibethinus HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
Gohir.A09G214900 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
Gohir.A10G084400 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
Gohir.D10G104250 Gossypium hirsutum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
Gorai.006G238100 Gossypium raimondii HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
Gorai.011G113800 Gossypium raimondii HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
MD15G1331500 Malus domestica HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 44.3
PSO170G6293 Papaver somniferum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 43.5
PSO210G1518 Papaver somniferum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 43.5
Psat4g205400 Pisum sativum HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 42.6
Sp6g33490 Schrenkiella parvula HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 44.3
Thecc.01G114000 Theobroma cacao HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 46.1
TPR.G29359 Trifolium pratense HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 42.6
GSVIVG01020782001 Vitis vinifera HOM05D002336 ORTHO05D002526 1.1e-14 83.6 115 43.5
CAN.G1463.20 Capsicum annuum HOM05D002336 ORTHO05D002526 1.4e-14 83.2 119 42.9
Cpa.g.sc191.12 Carica papaya HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 46.1
Ciclev10026735m.g Citrus clementina HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 46.1
HanXRQChr15g0471591 Helianthus annuus HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 44.3
Lj3g0026600 Lotus japonicus HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 42.6
Manes.08G141900 Manihot esculenta HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 46.1
Potri.005G084900 Populus trichocarpa HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 46.1
Potri.007G080400 Populus trichocarpa HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 46.1
TAR628G0102 Trochodendron aralioides HOM05D002336 ORTHO05D002526 1.4e-14 83.2 115 44.3
Actinidia27104 Actinidia chinensis HOM05D002336 ORTHO05D002526 1.8e-14 82.8 115 41.7
Aqoxy6G00465 Aquilegia oxysepala HOM05D002336 ORTHO05D002526 1.8e-14 82.8 115 44.3
CSS0043110 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 1.8e-14 82.8 115 40.0
Glyma.03G088500 Glycine max HOM05D002336 ORTHO05D002526 1.8e-14 82.8 115 45.2
QL06p031971 Quercus lobata HOM05D002336 ORTHO05D002526 1.8e-14 82.8 114 45.6
RcHm_v2.0_Chr2g0117051 Rosa chinensis HOM05D002336 ORTHO05D002526 1.8e-14 82.8 115 44.3
ATR0618G064 Amborella trichopoda HOM05D002336 ORTHO05D002526 2.4e-14 82.4 120 40.8
arahy.Tifrunner.gnm1.ann1.34WJMU Arachis hypogaea HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
arahy.Tifrunner.gnm1.ann1.P3KF1U Arachis hypogaea HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
CiPaw.04G091200 Carya illinoinensis HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
ClCG11G005330 Citrullus lanatus HOM05D002336 ORTHO05D002526 2.4e-14 82.4 85 51.8
ClCG11G005590 Citrullus lanatus HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 46.1
Glyma.16G084800 Glycine max HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 41.7
Gohir.D09G217400 Gossypium hirsutum HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
Peaxi162Scf00098g01412 Petunia axillaris HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 46.1
Phvul.010G030200 Phaseolus vulgaris HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
SalBow6G1409 Salvia bowleyana HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 42.6
Solyc06g073870.4 Solanum lycopersicum HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
Sopen06g030280 Solanum pennellii HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
VMungo0331G0164 Vigna mungo HOM05D002336 ORTHO05D002526 2.4e-14 82.4 115 45.2
Atru.chr8.85 Acer truncatum HOM05D002336 ORTHO05D002526 3.1e-14 82.0 116 43.1
CSS0019375 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 40.9
Ca_22452_v3 Cicer arietinum L. HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 41.7
Ca_23195_v3 Cicer arietinum L. HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 41.7
MELO3C020022.2 Cucumis melo HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 45.2
CsaV3_6G002410 Cucumis sativus L. HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 45.2
Hma1.2p1_0981F.1_g243690 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 3.1e-14 82.0 85 50.6
Hma1.2p1_1034F.1_g250410 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 3.1e-14 82.0 85 50.6
Manes.09G146500 Manihot esculenta HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 45.2
Sed0026127 Sechium edule HOM05D002336 ORTHO05D002526 3.1e-14 82.0 111 46.8
TPR.G24320 Trifolium pratense HOM05D002336 ORTHO05D002526 3.1e-14 82.0 115 45.2
MSTRG.17671 Avicennia marina HOM05D002336 ORTHO05D002526 4.1e-14 81.6 115 41.7
CSS0001624 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 4.1e-14 81.6 115 40.0
Lalb_Chr07g0194481 Lupinus albus HOM05D002336 ORTHO05D002526 4.1e-14 81.6 115 45.2
PGSC0003DMG400005907 Solanum tuberosum HOM05D002336 ORTHO05D002526 4.1e-14 81.6 115 45.2
Nitab4.5_0002183g0070 Nicotiana tabacum HOM05D002336 ORTHO05D002526 5.3e-14 81.3 119 42.0
vmacro15951 Vaccinium macrocarpon HOM05D002336 ORTHO05D002526 5.3e-14 81.3 111 43.2
Migut.N02435 Erythranthe guttata HOM05D002336 ORTHO05D002526 7.0e-14 80.9 116 43.1
BraA07t28014Z Brassica rapa HOM05D002336 ORTHO05D002526 9.1e-14 80.5 85 47.1
Aa31LG3G17210 Aethionema arabicum HOM05D002336 ORTHO05D002526 1.2e-13 80.1 119 43.7
Cpa.g.sc3.343 Carica papaya HOM05D002336 ORTHO05D002526 1.2e-13 80.1 116 41.4
Sed0001348 Sechium edule HOM05D002336 ORTHO05D002526 2.0e-13 79.3 115 45.2
ECA238G1091 Erigeron canadensis HOM05D002336 ORTHO05D002526 3.5e-13 78.6 118 43.2
FvH4_1g22750 Fragaria vesca HOM05D002336 ORTHO05D002526 3.5e-13 78.6 111 43.2
C05p46750 Brassica napus HOM05D002336 ORTHO05D002526 7.7e-13 77.4 85 47.1
MD06G1233600 Malus domestica HOM05D002336 ORTHO05D002526 1.7e-12 76.3 117 41.0
RcHm_v2.0_Chr7g0177821 Rosa chinensis HOM05D002336 ORTHO05D002526 1.7e-12 76.3 117 41.9
TWI81G0046 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 1.7e-12 76.3 116 44.8
Zm00001eb209440 Zea mays HOM05D002336 ORTHO05D002526 2.2e-12 75.9 123 42.3
CBR_g17935 Chara braunii HOM05D002336 ORTHO05D002526 2.9e-12 75.5 117 37.6
Oeu031443.2 Olea europaea HOM05D002336 ORTHO05D002526 2.9e-12 75.5 127 41.7
BcaC05g26583 Brassica carinata HOM05D002336 ORTHO05D002526 3.8e-12 75.1 92 45.7
Nitab4.5_0000875g0080 Nicotiana tabacum HOM05D002336 ORTHO05D002526 8.5e-12 73.9 127 39.4
Os02g0116900 Oryza sativa ssp. japonica HOM05D002336 ORTHO05D002526 8.5e-12 73.9 122 44.3
Nn5g28888 Nelumbo nucifera HOM05D002336 ORTHO05D002526 1.1e-11 73.6 115 42.6
Prupe.5G238000 Prunus persica HOM05D002336 ORTHO05D002526 1.1e-11 73.6 117 41.0
BcaC03g13284 Brassica carinata HOM05D002336 ORTHO05D002526 1.5e-11 73.2 91 48.4
Dinv42686 Davidia involucrata HOM05D002336 ORTHO05D002526 1.5e-11 73.2 90 46.7
MD14G1240400 Malus domestica HOM05D002336 ORTHO05D002526 2.5e-11 72.4 123 39.0
COL.COLO4_11002 Corchorus olitorius HOM05D002336 ORTHO05D002526 4.2e-11 71.6 124 41.1
Duzib187G0505 Durio zibethinus HOM05D002336 ORTHO05D002526 5.5e-11 71.2 88 48.9
RcHm_v2.0_Chr6g0293821 Rosa chinensis HOM05D002336 ORTHO05D002526 9.4e-11 70.5 121 39.7
C03p04780 Brassica napus HOM05D002336 ORTHO05D002526 2.1e-10 69.3 72 48.6
MBI12_g40059_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 2.7e-10 68.9 91 46.2
CANSAT01G3015 Cannabis sativa HOM05D002336 ORTHO05D002526 4.7e-10 68.2 84 47.6
Nitab4.5_0002426g0100 Nicotiana tabacum HOM05D002336 ORTHO05D002526 4.7e-10 68.2 115 42.6
MBI12_g16727_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 8.0e-10 67.4 91 45.1
Glyma.08G146800 Glycine max HOM05D002336 ORTHO05D002526 1.4e-09 66.6 85 45.9
FAN19G2422 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.8e-09 66.2 132 36.4
FAN23G2858 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.8e-09 66.2 132 36.4
FAN26G2884 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.8e-09 66.2 132 36.4
FAN28G0203 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.8e-09 66.2 132 36.4
BcaC05g28573 Brassica carinata HOM05D002336 ORTHO05D002526 2.3e-09 65.9 104 38.5
Nitab4.5_0005569g0010 Nicotiana tabacum HOM05D002336 ORTHO05D002526 2.3e-09 65.9 115 41.7
Peaxi162Scf00717g00212 Petunia axillaris HOM05D002336 ORTHO05D002526 3.0e-09 65.5 115 42.6
BolC3t13012H Brassica oleracea HOM05D002336 ORTHO05D002526 4.0e-09 65.1 109 37.6
BcaNung06948 Brassica carinata HOM05D002336 ORTHO05D002526 1.2e-08 63.5 92 40.2
MELO3C022087.2 Cucumis melo HOM05D002336 ORTHO05D002526 1.2e-08 63.5 85 44.7
Prupe.4G002300 Prunus persica HOM05D002336 ORTHO05D002526 2.0e-08 62.8 81 42.0
BolC5t31351H Brassica oleracea HOM05D002336 ORTHO05D002526 2.6e-08 62.4 122 37.7
Aqoxy3G03324 Aquilegia oxysepala HOM05D002336 ORTHO05D002526 3.4e-08 62.0 82 37.8
Manes.09G085000 Manihot esculenta HOM05D002336 ORTHO05D002526 4.4e-08 61.6 81 38.3
Atru.chr1.2178 Acer truncatum HOM05D002336 ORTHO05D002526 1.3e-07 60.1 82 40.2
CDE07G0676 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 2.2e-07 59.3 80 40.0
MBI19_g01939_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 2.2e-07 59.3 111 37.8
Ca_00777_v3 Cicer arietinum L. HOM05D000491 ORTHO05D000359 2.8e-07 58.9 81 40.7
SGA_v2.0_scaffold16G07523 Striga asiatica HOM05D002336 ORTHO05D002526 2.8e-07 58.9 115 36.5
BolC5t31354H Brassica oleracea HOM05D002336 ORTHO05D002526 6.3e-07 57.8 122 36.9
Duzib235G1184 Durio zibethinus HOM05D002336 ORTHO05D002526 6.3e-07 57.8 112 38.4
Lalb_Chr20g0119621 Lupinus albus HOM05D002336 ORTHO05D002526 6.3e-07 57.8 81 42.0
VMungo0540G1254 Vigna mungo HOM05D002336 ORTHO05D002526 6.3e-07 57.8 82 37.8
BcaC05g26588 Brassica carinata HOM05D002336 ORTHO05D002526 8.3e-07 57.4 95 41.1
Medtr2g027530 Medicago truncatula HOM05D002336 ORTHO05D002526 1.1e-06 57.0 86 38.4
BcaC05g26585 Brassica carinata HOM05D002336 ORTHO05D002526 1.4e-06 56.6 115 37.4
CiPaw.10G083700 Carya illinoinensis HOM05D002336 ORTHO05D002526 1.4e-06 56.6 81 39.5
CsaV3_6G048110 Cucumis sativus L. HOM05D002336 ORTHO05D002526 1.4e-06 56.6 83 34.9
EL10Ac9g22885 Beta vulgaris HOM05D002336 ORTHO05D002526 1.8e-06 56.2 81 39.5
Duzib235G0330 Durio zibethinus HOM05D002336 ORTHO05D002526 1.8e-06 56.2 112 38.4
Sabra07G0067500 Salix brachista HOM05D002336 ORTHO05D002526 1.8e-06 56.2 115 37.4
PGSC0003DMG400046105 Solanum tuberosum HOM05D002336 ORTHO05D002526 1.8e-06 56.2 108 33.3
MELO3C007997.2 Cucumis melo HOM05D002336 ORTHO05D002526 2.4e-06 55.8 83 34.9
MD05G1363300 Malus domestica HOM05D002336 ORTHO05D002526 2.4e-06 55.8 81 38.3
PSO210G4730 Papaver somniferum HOM05D002336 ORTHO05D002526 2.4e-06 55.8 82 39.0
BcaB01g05556 Brassica carinata HOM05D002336 ORTHO05D002526 3.1e-06 55.5 115 36.5
Lalb_Chr18g0057441 Lupinus albus HOM05D002336 ORTHO05D002526 3.1e-06 55.5 81 39.5
MD10G1340900 Malus domestica HOM05D002336 ORTHO05D002526 3.1e-06 55.5 81 37.0
Gohir.A06G157300 Gossypium hirsutum HOM05D002336 ORTHO05D002526 4.1e-06 55.1 82 41.5
Gohir.D06G163600 Gossypium hirsutum HOM05D002336 ORTHO05D002526 4.1e-06 55.1 82 41.5
Gorai.010G190700 Gossypium raimondii HOM05D002336 ORTHO05D002526 4.1e-06 55.1 82 41.5
CSS0011496 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 7.0e-06 54.3 81 35.8
Lj6g0012975 Lotus japonicus HOM05D002336 ORTHO05D002526 7.0e-06 54.3 80 37.5
MBI17_g08176_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 7.0e-06 54.3 83 42.2
QL03p035757 Quercus lobata HOM05D002336 ORTHO05D002526 9.1e-06 53.9 80 38.8


User provided reference genes

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