Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 2.1e-243 845.5 513 100.0
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 2.2e-232 808.9 513 94.9
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 6.7e-229 797.3 513 92.6
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 1.5e-228 796.2 513 88.9
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 4.8e-227 791.2 513 90.6
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 1.1e-226 790.0 513 90.6
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 3.1e-226 788.5 513 87.7
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 2.6e-225 785.4 511 92.0
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 3.4e-225 785.0 511 92.8
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 3.4e-225 785.0 511 87.9
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 3.8e-224 781.6 513 92.4
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 8.5e-224 780.4 511 91.8
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 1.1e-223 780.0 513 86.5
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 1.1e-223 780.0 513 90.4
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 1.9e-223 779.2 511 87.5
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 2.5e-223 778.9 511 90.0
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 3.2e-223 778.5 513 90.3
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 3.2e-223 778.5 513 92.0
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 5.5e-223 777.7 511 87.9
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 9.4e-223 776.9 511 91.6
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 2.1e-222 775.8 511 90.6
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 3.6e-222 775.0 511 90.4
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 1.0e-221 773.5 511 86.5
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 3.0e-221 771.9 500 91.2
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 3.9e-221 771.5 509 86.1
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 3.9e-221 771.5 511 90.6
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 5.1e-221 771.2 511 86.3
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 6.7e-221 770.8 511 90.2
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 8.8e-221 770.4 511 91.0
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.1e-220 770.0 513 89.5
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.1e-220 770.0 511 91.8
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 1.5e-220 769.6 511 91.0
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 2.0e-220 769.2 511 90.0
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.0e-220 769.2 511 91.2
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 4.3e-220 768.1 504 91.5
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 5.7e-220 767.7 511 85.3
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 5.7e-220 767.7 511 86.7
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 9.7e-220 766.9 511 90.4
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.3e-219 766.5 511 89.4
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.3e-219 766.5 511 89.4
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 1.7e-219 766.1 511 90.2
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.2e-219 765.8 511 89.8
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 2.2e-219 765.8 513 89.1
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 2.8e-219 765.4 511 90.6
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.7e-219 765.0 511 90.4
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 8.2e-219 763.8 511 90.6
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 4.1e-218 761.5 510 90.2
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 4.1e-218 761.5 511 88.3
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 1.2e-217 760.0 511 89.6
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 1.5e-217 759.6 511 89.8
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 1.5e-217 759.6 511 87.9
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 2.6e-217 758.8 511 90.8
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 3.4e-217 758.4 511 88.1
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 4.5e-217 758.1 511 89.2
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 7.7e-217 757.3 511 88.8
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 2.2e-216 755.7 512 87.9
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 2.9e-216 755.4 513 90.8
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 5.5e-215 751.1 513 89.9
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 5.5e-215 751.1 511 87.9
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.2e-214 750.0 511 83.0
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 2.1e-214 749.2 512 87.1
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 6.1e-214 747.7 511 87.7
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 7.9e-214 747.3 512 87.9
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 1.4e-213 746.5 511 88.8
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 1.4e-213 746.5 512 88.3
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.8e-213 746.1 512 89.1
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 3.0e-213 745.3 536 81.3
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 3.0e-213 745.3 511 86.1
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 3.0e-213 745.3 511 86.1
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 3.9e-213 745.0 512 86.1
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.1e-212 743.4 511 84.0
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 1.1e-212 743.4 511 85.9
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 1.5e-212 743.0 511 88.5
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 2.0e-212 742.7 511 88.3
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 3.3e-212 741.9 517 86.3
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 3.3e-212 741.9 511 85.7
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 4.4e-212 741.5 511 88.6
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 5.7e-212 741.1 511 88.3
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 5.7e-212 741.1 510 83.3
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 1.7e-211 739.6 533 76.7
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 6.3e-211 737.6 520 86.3
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 1.1e-210 736.9 504 86.5
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.8e-210 736.1 511 88.5
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.4e-210 735.7 504 88.3
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 5.3e-210 734.6 511 82.8
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 5.3e-210 734.6 511 82.8
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.2e-209 733.4 504 86.9
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 6.1e-206 721.1 539 78.7
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 1.4e-205 719.9 507 85.8
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 6.3e-203 711.1 511 81.4
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.2e-201 706.8 511 83.4
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 4.2e-199 698.4 511 74.2
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.7e-198 695.7 507 85.2
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.3e-197 692.6 511 79.6
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 6.8e-197 691.0 485 85.8
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.2e-196 690.3 532 79.7
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.5e-196 689.9 511 81.2
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 3.5e-193 678.7 511 73.6
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 1.7e-192 676.4 554 75.5
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 5.0e-192 674.9 523 81.5
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 1.4e-189 666.8 511 79.6
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.5e-188 663.3 461 90.5
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 1.5e-188 663.3 549 69.6
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 4.4e-188 661.8 513 72.5
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 3.7e-187 658.7 484 83.3
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 7.7e-185 651.0 465 86.9
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.7e-179 632.1 511 80.2
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.9e-176 622.5 428 89.5
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 1.1e-175 620.5 430 90.5
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 3.1e-173 612.5 435 84.6
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 4.3e-167 592.0 520 70.4
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.3e-152 543.1 414 84.3
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 6.6e-152 541.6 512 66.6
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 3.3e-135 486.1 266 89.5
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 2.1e-129 466.8 251 92.4
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 3.0e-120 436.4 322 82.6
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 3.9e-120 436.0 309 79.9
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 3.3e-111 406.4 382 59.7
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 1.4e-101 374.4 207 91.8
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 3.1e-101 373.2 207 91.3
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 1.1e-87 328.2 365 72.1
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.0e-76 290.8 257 79.8
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 8.0e-73 278.9 517 48.5
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 6.6e-67 259.2 175 85.7
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 7.3e-66 255.8 528 37.3
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 1.6e-60 238.0 133 91.7
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 3.0e-43 180.6 99 82.8
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 7.3e-42 176.0 147 61.9
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 5.8e-39 166.4 318 43.7
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 4.9e-38 163.3 80 93.8
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.9e-34 151.4 137 65.7
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 8.1e-33 146.0 243 43.6
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 1.5e-31 141.7 77 90.9
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 7.6e-31 139.4 299 32.8
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 8.4e-30 136.0 70 95.7
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 1.1e-29 135.6 107 65.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 6.0e-28 129.8 69 92.8
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 5.1e-27 126.7 64 93.8
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 5.1e-27 126.7 64 93.8
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 3.2e-21 107.5 52 92.3
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 5.1e-19 100.1 56 80.4
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 6.7e-19 99.8 57 78.9
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 1.6e-17 95.1 46 89.1
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 3.6e-17 94.0 73 63.0
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 3.6e-17 94.0 73 63.0
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.4e-16 91.3 47 95.7
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 3.1e-16 90.9 46 84.8
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.6e-15 87.8 128 42.2
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 1.3e-11 75.5 105 44.8
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 8.7e-11 72.8 134 72.4
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 9.6e-10 69.3 36 83.3
Oeu002300.1 Olea europaea HOM05D004842 ORTHO05D005929 1.6e-09 68.6 62 62.9
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 1.4e-08 65.5 35 85.7


User provided reference genes

Program Settings