Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 4.6e-253 877.5 464 100.0
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 7.7e-184 647.5 622 60.1
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 3.6e-181 638.6 620 59.0
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 7.5e-179 630.9 621 58.3
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 2.9e-178 629.0 621 58.5
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 1.5e-174 616.7 615 57.7
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 3.3e-174 615.5 621 57.3
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 3.3e-174 615.5 610 57.9
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 7.3e-174 614.4 621 57.3
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 1.2e-173 613.6 621 57.0
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 6.2e-173 611.3 621 56.8
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 6.2e-173 611.3 622 57.1
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 8.1e-157 557.8 620 53.1
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.3e-143 513.8 624 48.1
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.3e-141 507.3 628 47.0
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.8e-140 503.4 630 47.0
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 9.0e-140 501.1 629 47.2
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 3.4e-139 499.2 627 47.8
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 5.8e-139 498.4 629 46.9
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 6.4e-138 495.0 626 46.2
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 6.4e-138 495.0 629 46.4
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 8.4e-138 494.6 629 45.3
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.4e-137 493.0 628 45.2
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 1.2e-136 490.7 629 45.2
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.1e-136 490.0 608 46.7
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 2.7e-136 489.6 628 44.9
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 2.3e-135 486.5 623 46.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 3.0e-135 486.1 628 45.5
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.9e-134 483.4 626 45.5
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.3e-134 482.6 609 46.8
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 3.3e-134 482.6 630 46.0
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 3.3e-134 482.6 662 44.1
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.3e-134 482.3 628 45.5
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 5.6e-134 481.9 628 45.5
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 7.4e-134 481.5 624 44.9
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 9.6e-134 481.1 625 44.8
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 3.6e-133 479.2 624 44.7
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.8e-133 478.8 597 46.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.4e-132 477.2 628 45.1
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.8e-132 476.9 627 45.5
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 4.0e-132 475.7 625 45.4
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.5e-131 473.8 627 44.5
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 4.5e-131 472.2 627 44.3
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 7.6e-131 471.5 625 45.0
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 1.3e-130 470.7 630 44.4
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 4.9e-130 468.8 629 44.7
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 8.4e-130 468.0 603 44.9
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 1.9e-129 466.8 625 45.1
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.4e-129 466.5 628 43.6
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 4.2e-129 465.7 628 43.8
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 9.3e-129 464.5 627 43.5
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 3.9e-127 459.1 632 43.5
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 5.1e-127 458.8 603 45.4
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 8.7e-127 458.0 635 43.6
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.5e-126 457.2 629 43.7
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 9.6e-126 454.5 625 43.5
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 1.3e-125 454.1 627 42.9
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 3.7e-125 452.6 616 43.8
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.1e-125 451.4 720 40.6
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 1.4e-124 450.7 628 43.6
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 6.9e-124 448.4 592 44.8
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.5e-123 447.2 630 43.0
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 2.9e-122 443.0 628 42.5
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 2.9e-122 443.0 532 47.0
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 6.5e-122 441.8 624 42.8
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 4.2e-121 439.1 570 44.4
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 3.9e-119 432.6 630 41.4
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 6.7e-119 431.8 623 41.9
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.9e-118 430.3 626 41.7
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.3e-117 427.6 618 42.7
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.3e-117 427.6 626 42.0
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 4.8e-117 425.6 626 41.7
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 6.3e-117 425.2 586 43.7
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 6.7e-111 405.2 571 42.7
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 5.9e-99 365.5 494 44.7
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 3.9e-95 352.8 540 41.9
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.6e-94 350.1 563 41.9
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.1e-92 343.2 713 36.3
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.6e-91 340.9 561 40.1
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 2.6e-91 340.1 541 41.8
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.8e-87 327.4 521 41.1
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.2e-83 314.7 536 37.3
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 5.2e-79 299.3 433 40.9
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 7.7e-75 285.4 403 43.2
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 6.5e-74 282.3 487 36.3
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 8.5e-74 282.0 488 36.3
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 3.2e-73 280.0 598 35.5
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 1.6e-67 261.2 629 32.3
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 5.6e-65 252.7 413 41.2
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 7.5e-62 242.3 612 31.9
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 4.6e-59 233.0 300 46.0
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 7.8e-59 232.3 307 46.6
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 2.5e-57 227.3 622 31.5
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 5.6e-57 226.1 241 50.6
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 3.6e-56 223.4 242 51.7
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 8.0e-56 222.2 272 48.2
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 8.3e-53 212.2 230 52.2
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.2e-51 208.4 236 46.6
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 4.6e-51 206.5 233 49.4
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 7.8e-51 205.7 247 47.0
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 3.2e-44 183.7 225 46.7
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 3.9e-42 176.8 183 52.5
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.5e-41 174.1 165 54.5
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 2.8e-40 170.6 162 51.2
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 7.1e-36 156.0 244 41.0
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 8.1e-32 142.5 238 42.4
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.4e-31 141.7 134 53.7
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 3.4e-30 137.1 152 52.0
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 2.2e-29 134.4 168 47.6
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 7.1e-28 129.4 135 47.4
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.2e-27 128.6 174 44.3
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 2.4e-20 104.4 88 55.7
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 1.2e-19 102.1 118 42.4
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 2.7e-19 100.9 114 53.5
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 2.3e-18 97.8 402 25.1
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 1.9e-12 78.2 59 61.0
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 9.3e-12 75.9 68 58.8
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 3.7e-08 63.9 103 39.8
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 6.2e-08 63.2 274 25.2
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 5.3e-07 60.1 38 76.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 6.9e-07 59.7 252 27.0


User provided reference genes

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