Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 0.0e+00 1228.8 626 100.0
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.3e-278 960.3 628 81.7
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 8.9e-268 926.8 623 75.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.3e-255 886.3 644 70.7
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.2e-248 863.2 650 68.2
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 8.4e-242 840.5 650 65.7
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 3.0e-239 832.0 649 65.8
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 4.3e-238 828.2 677 63.5
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.3e-237 826.6 651 65.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.1e-237 825.9 649 65.3
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 8.1e-237 823.9 642 66.0
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 4.0e-236 821.6 650 65.2
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 1.7e-234 816.2 650 64.6
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 4.2e-233 811.6 650 65.1
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 2.1e-232 809.3 648 64.2
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 2.7e-232 808.9 629 65.3
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 3.5e-232 808.5 644 64.9
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.0e-231 807.0 641 64.7
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 1.8e-231 806.2 647 64.9
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 2.3e-231 805.8 648 65.0
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 3.0e-231 805.4 646 64.6
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 5.1e-231 804.7 649 64.6
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 4.3e-230 801.6 648 63.9
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 7.4e-230 800.8 649 63.6
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 2.4e-228 795.8 649 63.3
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 5.3e-228 794.7 653 62.8
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 6.9e-228 794.3 649 63.0
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.2e-227 793.5 650 63.8
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 2.0e-227 792.7 651 62.4
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 2.2e-226 789.3 728 58.0
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-225 785.8 647 62.9
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 3.2e-225 785.4 649 63.5
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 3.2e-225 785.4 649 63.5
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 2.1e-224 782.7 646 63.0
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 3.9e-223 778.5 651 63.1
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 1.5e-222 776.5 642 61.8
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 3.3e-222 775.4 643 62.1
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 7.4e-222 774.2 650 62.6
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 1.6e-221 773.1 651 61.6
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.4e-220 770.0 649 61.8
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 1.4e-220 770.0 656 62.7
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.1e-220 768.5 649 61.6
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 5.0e-218 761.5 625 62.1
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 6.5e-218 761.1 648 59.7
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 1.4e-217 760.0 646 59.6
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 9.4e-217 757.3 638 61.9
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 3.6e-216 755.4 639 61.8
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.6e-216 755.0 627 62.4
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 7.9e-216 754.2 650 60.0
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 8.8e-215 750.7 624 62.7
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 4.8e-213 745.0 646 60.1
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 1.1e-212 743.8 646 60.8
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.2e-211 740.3 648 60.3
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.5e-211 740.0 639 61.5
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 2.2e-210 736.1 640 59.5
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.4e-209 733.4 640 59.2
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.2e-208 730.3 647 59.5
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 3.9e-207 725.3 634 58.4
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 5.1e-207 724.9 610 62.6
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 2.6e-206 722.6 640 57.8
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 2.6e-206 722.6 629 58.5
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 3.3e-206 722.2 640 57.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 5.7e-206 721.5 641 58.5
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 5.7e-206 721.5 646 57.0
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.3e-205 720.3 645 60.3
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 1.7e-205 719.9 638 58.0
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 6.3e-205 718.0 640 57.5
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.1e-204 717.2 646 57.1
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 1.4e-204 716.8 638 57.4
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 3.5e-203 712.2 641 57.9
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 2.3e-199 699.5 655 57.9
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 5.3e-196 688.3 627 58.4
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 1.2e-192 677.2 500 67.0
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 1.4e-191 673.7 647 54.3
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 7.5e-190 667.9 617 58.3
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.3e-181 640.6 761 49.4
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 9.5e-177 624.4 650 54.6
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 3.1e-167 592.8 608 54.1
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.6e-166 589.7 657 52.2
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.1e-164 584.3 646 52.6
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 8.6e-162 574.7 648 52.9
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 8.1e-160 568.2 431 66.1
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 9.2e-156 554.7 648 47.7
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 6.0e-139 498.8 586 45.9
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 8.7e-138 495.0 585 45.5
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.9e-135 485.3 456 57.2
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 2.6e-126 456.8 644 41.0
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 3.3e-121 439.9 458 55.2
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 7.6e-118 428.7 623 41.9
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 9.3e-116 421.8 642 38.8
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 1.6e-115 421.0 639 40.4
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 1.4e-108 397.9 422 52.6
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 7.2e-108 395.6 267 71.9
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 3.7e-104 383.3 285 64.2
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 6.3e-104 382.5 329 61.7
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.1e-103 381.7 582 40.5
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 9.4e-92 342.0 311 59.5
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 2.5e-84 317.4 316 57.9
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.0e-82 312.0 241 64.3
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.3e-80 305.1 247 61.1
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 1.1e-79 302.0 246 62.2
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.1e-76 292.0 185 78.9
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 1.6e-67 261.5 248 56.0
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 8.6e-61 239.2 253 52.6
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 3.6e-59 233.8 246 56.1
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.4e-58 231.9 189 66.7
Os07g0184900 Oryza sativa ssp. japonica HOM05D006139 ORTHO05D007681 1.3e-56 225.3 158 67.7
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 2.4e-47 194.5 180 58.9
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 5.4e-47 193.4 136 73.5
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 3.5e-46 190.7 174 57.5
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 3.0e-45 187.6 92 100.0
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 4.0e-42 177.2 716 27.0
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 6.6e-37 159.8 144 58.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 1.6e-35 155.2 630 26.2
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 1.1e-31 142.5 133 55.6
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 3.8e-24 117.5 128 50.8
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 3.4e-17 94.4 74 56.8
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 3.8e-16 90.9 96 52.1
CARHR154100 Cardamine hirsuta HOM05D006139 ORTHO05D007681 4.9e-16 90.5 66 66.7
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 3.0e-13 81.3 77 57.1
vmacro12608 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 3.9e-13 80.9 63 66.7
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 3.3e-12 77.8 65 53.8
Zm00001eb114470 Zea mays HOM05D006139 ORTHO05D007681 4.3e-12 77.4 65 56.9
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.3e-11 75.9 111 45.0
Eucgr.L02132 Eucalyptus grandis HOM05D006139 ORTHO05D007681 6.9e-10 70.1 48 70.8
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 5.8e-09 67.0 76 51.3


User provided reference genes

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