Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011191 Chenopodium quinoa HOM05D001458 ORTHO05D137595 1.7e-207 725.7 348 100.0
AUR62013295 Chenopodium quinoa HOM05D001458 ORTHO05D138359 4.9e-66 255.8 131 94.7
Nitab4.5_0000848g0150 Nicotiana tabacum HOM05D001458 ORTHO05D006787 1.3e-18 98.2 198 32.8
Nitab4.5_0006316g0010 Nicotiana tabacum HOM05D001458 ORTHO05D006787 1.3e-18 98.2 198 32.8
Migut.L01653 Erythranthe guttata HOM05D001458 ORTHO05D006787 3.8e-18 96.7 199 33.7
Sopen09g002080 Solanum pennellii HOM05D001458 ORTHO05D006787 3.8e-18 96.7 172 35.5
PGSC0003DMG400027900 Solanum tuberosum HOM05D001458 ORTHO05D006787 3.8e-18 96.7 172 35.5
Peaxi162Scf01517g00015 Petunia axillaris HOM05D001458 ORTHO05D006787 5.0e-18 96.3 172 35.5
SalBow4G2907 Salvia bowleyana HOM05D001458 ORTHO05D006787 5.0e-18 96.3 198 32.8
Cc06_g03430 Coffea canephora HOM05D001458 ORTHO05D006787 6.5e-18 95.9 173 36.4
Duzib128G1651 Durio zibethinus HOM05D001458 ORTHO05D006787 6.5e-18 95.9 198 32.3
Aa31LG1G22080 Aethionema arabicum HOM05D001458 ORTHO05D006787 8.5e-18 95.5 191 33.5
Lj3A977T51 Lonicera japonica HOM05D001458 ORTHO05D006787 1.1e-17 95.1 198 32.3
AL6G12090 Arabidopsis lyrata HOM05D001458 ORTHO05D006787 1.5e-17 94.7 198 31.8
AT5G02820 Arabidopsis thaliana HOM05D001458 ORTHO05D006787 1.5e-17 94.7 198 31.8
Carub.0006s0162 Capsella rubella HOM05D001458 ORTHO05D006787 1.5e-17 94.7 198 31.8
DCAR_009271 Daucus carota HOM05D001458 ORTHO05D006787 1.5e-17 94.7 198 31.8
CAN.G350.46 Capsicum annuum HOM05D001458 ORTHO05D006787 1.9e-17 94.4 172 34.9
PSO384G1578 Papaver somniferum HOM05D001458 ORTHO05D006787 1.9e-17 94.4 198 32.3
Potri.006G132600 Populus trichocarpa HOM05D001458 ORTHO05D006787 2.5e-17 94.0 198 31.8
Sabra06G0104100 Salix brachista HOM05D001458 ORTHO05D006787 2.5e-17 94.0 198 31.8
THA.LOC104816314 Tarenaya hassleriana HOM05D001458 ORTHO05D006787 2.5e-17 94.0 173 35.8
Ciclev10011761m.g Citrus clementina HOM05D001458 ORTHO05D006787 3.2e-17 93.6 172 34.9
Gohir.A04G077200 Gossypium hirsutum HOM05D001458 ORTHO05D006787 3.2e-17 93.6 172 34.9
GSVIVG01025540001 Vitis vinifera HOM05D001458 ORTHO05D006787 3.2e-17 93.6 172 35.5
Dinv35695 Davidia involucrata HOM05D001458 ORTHO05D006787 4.2e-17 93.2 198 31.8
ECA233G5957 Erigeron canadensis HOM05D001458 ORTHO05D006787 4.2e-17 93.2 172 34.9
MD04G1113900 Malus domestica HOM05D001458 ORTHO05D006787 4.2e-17 93.2 172 34.3
BcaC06g32012 Brassica carinata HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
A10p32900 Brassica napus HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
C09p73830 Brassica napus HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
BolC9t60117H Brassica oleracea HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
BraA10t45327Z Brassica rapa HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
CARHR210510 Cardamine hirsuta HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
AUR62040528 Chenopodium quinoa HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
AUR62042916 Chenopodium quinoa HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
COL.COLO4_27103 Corchorus olitorius HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
Thhalv10015802m.g Eutrema salsugineum HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
Lalb_Chr21g0314581 Lupinus albus HOM05D001458 ORTHO05D006787 5.5e-17 92.8 198 31.8
RhsimUnG0119500 Rhododendron simsii HOM05D001458 ORTHO05D006787 5.5e-17 92.8 198 31.8
Sp6g39760 Schrenkiella parvula HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
TWI18G0556 Tripterygium wilfordii HOM05D001458 ORTHO05D006787 5.5e-17 92.8 172 34.3
CSS0026634 Camellia sinensis var. sinensis HOM05D001458 ORTHO05D006787 7.2e-17 92.4 198 31.3
Gohir.D04G116300 Gossypium hirsutum HOM05D001458 ORTHO05D006787 7.2e-17 92.4 172 34.3
Gorai.009G420900 Gossypium raimondii HOM05D001458 ORTHO05D006787 7.2e-17 92.4 172 34.3
TAR369G1107 Trochodendron aralioides HOM05D001458 ORTHO05D006787 7.2e-17 92.4 198 31.3
Ah.15g092050 Amaranthus hybridus HOM05D001458 ORTHO05D006787 9.4e-17 92.0 172 34.3
Phvul.007G162700 Phaseolus vulgaris HOM05D001458 ORTHO05D006787 9.4e-17 92.0 198 31.3
Sed0021994 Sechium edule HOM05D001458 ORTHO05D006787 9.4e-17 92.0 198 30.8
Atru.BG.202.p Acer truncatum HOM05D001458 ORTHO05D006787 1.2e-16 91.7 173 36.4
CsaV3_4G024390 Cucumis sativus L. HOM05D001458 ORTHO05D006787 1.2e-16 91.7 172 34.3
Glyma.13G136100 Glycine max HOM05D001458 ORTHO05D006787 1.2e-16 91.7 198 31.3
Hma1.2p1_0350F.1_g132690 Hydrangea macrophylla HOM05D001458 ORTHO05D006787 1.2e-16 91.7 198 30.8
Manes.09G070800 Manihot esculenta HOM05D001458 ORTHO05D006787 1.2e-16 91.7 172 34.3
Thecc.05G052100 Theobroma cacao HOM05D001458 ORTHO05D006787 1.2e-16 91.7 173 34.7
vmacro20070 Vaccinium macrocarpon HOM05D001458 ORTHO05D006787 1.2e-16 91.7 198 30.8
arahy.Tifrunner.gnm1.ann1.DP4C8A Arachis hypogaea HOM05D001458 ORTHO05D006787 1.6e-16 91.3 198 31.3
MELO3C003071.2 Cucumis melo HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 34.3
FvH4_1g22710 Fragaria vesca HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 33.7
FAN23G1932 Fragaria x ananassa HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 33.7
FAN26G1855 Fragaria x ananassa HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 33.7
Glyma.10G048300 Glycine max HOM05D001458 ORTHO05D006787 1.6e-16 91.3 198 31.3
HanXRQChr02g0051861 Helianthus annuus HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 34.3
Nn2g10614 Nelumbo nucifera HOM05D001458 ORTHO05D006787 1.6e-16 91.3 172 34.3
PSO339G6008 Papaver somniferum HOM05D001458 ORTHO05D006787 1.6e-16 91.3 198 31.8
QL07p045562 Quercus lobata HOM05D001458 ORTHO05D006787 1.6e-16 91.3 198 30.8
EL10Ac7g17326 Beta vulgaris HOM05D001458 ORTHO05D006787 2.1e-16 90.9 161 36.0
CANSAT80G0404 Cannabis sativa HOM05D001458 ORTHO05D006787 2.1e-16 90.9 172 34.3
CiPaw.09G182000 Carya illinoinensis HOM05D001458 ORTHO05D006787 2.1e-16 90.9 172 34.3
Haze_20671 Corylus avellana HOM05D001458 ORTHO05D006787 2.1e-16 90.9 172 34.3
Oeu034821.1 Olea europaea HOM05D001458 ORTHO05D006787 2.1e-16 90.9 198 31.3
PGR004G0986 Punica granatum HOM05D001458 ORTHO05D006787 2.1e-16 90.9 172 33.7
SGA_v2.0_scaffold94G28657 Striga asiatica HOM05D001458 ORTHO05D006787 2.1e-16 90.9 198 31.3
TPR.G35661 Trifolium pratense HOM05D001458 ORTHO05D006787 2.1e-16 90.9 195 30.3
VMungo0464G1099 Vigna mungo HOM05D001458 ORTHO05D006787 2.1e-16 90.9 198 30.8
arahy.Tifrunner.gnm1.ann1.YX38EM Arachis hypogaea HOM05D001458 ORTHO05D006787 2.7e-16 90.5 198 30.8
Eucgr.K03202 Eucalyptus grandis HOM05D001458 ORTHO05D006787 2.7e-16 90.5 172 33.7
Psat0ss6317g0080 Pisum sativum HOM05D001458 ORTHO05D006787 2.7e-16 90.5 195 30.3
Cfa017488 Carpinus fangiana HOM05D001458 ORTHO05D006787 3.6e-16 90.1 172 33.7
ClCG04G008770 Citrullus lanatus HOM05D001458 ORTHO05D006787 3.6e-16 90.1 172 33.7
Lj5g0024683 Lotus japonicus HOM05D001458 ORTHO05D006787 3.6e-16 90.1 195 30.3
Medtr1g067040 Medicago truncatula HOM05D001458 ORTHO05D006787 3.6e-16 90.1 195 30.3
Prupe.6G243200 Prunus persica HOM05D001458 ORTHO05D006787 3.6e-16 90.1 172 33.1
RcHm_v2.0_Chr2g0116961 Rosa chinensis HOM05D001458 ORTHO05D006787 3.6e-16 90.1 172 33.1
Aqoxy4G03150 Aquilegia oxysepala HOM05D001458 ORTHO05D006787 4.7e-16 89.7 198 30.3
Ca_02309_v3 Cicer arietinum L. HOM05D001458 ORTHO05D006787 4.7e-16 89.7 169 33.1
Mapoly0114s0011 Marchantia polymorpha HOM05D001458 ORTHO05D006787 4.7e-16 89.7 198 30.8
Lsat_1_v5_gn_6_29580 Lactuca sativa HOM05D001458 ORTHO05D006787 6.1e-16 89.4 168 33.9
Sc07g0006220 Simmondsia chinensis HOM05D001458 ORTHO05D006787 8.0e-16 89.0 172 33.1
SMO266G0075 Selaginella moellendorffii HOM05D001458 ORTHO05D006787 1.4e-15 88.2 198 30.8
Actinidia11230 Actinidia chinensis HOM05D001458 ORTHO05D006787 1.8e-15 87.8 170 32.9
AagrBONN_evm.TU.Sc2ySwM_228.407 Anthoceros agrestis HOM05D001458 ORTHO05D006787 1.8e-15 87.8 158 35.4
Cre02.g084800 Chlamydomonas reinhardtii HOM05D001458 ORTHO05D006787 3.0e-15 87.0 158 36.7
ATR0594G128 Amborella trichopoda HOM05D001458 ORTHO05D006787 5.2e-15 86.3 195 29.2
CBR_g20285 Chara braunii HOM05D001458 ORTHO05D006787 2.0e-14 84.3 192 30.2
SEGI_09198 Sequoiadendron giganteum HOM05D001458 ORTHO05D006787 2.6e-14 84.0 191 29.3
MBI14_g28308_MAGBIO Magnolia biondii HOM05D001458 ORTHO05D006787 3.3e-14 83.6 154 34.4
HPP92_003602 Vanilla planifolia HOM05D001458 ORTHO05D006787 3.3e-14 83.6 195 29.2
Pp3c8_12030 Physcomitrium patens HOM05D001458 ORTHO05D006787 5.7e-14 82.8 158 34.2
MCO01G458 Micromonas commoda HOM05D001458 ORTHO05D006787 9.7e-14 82.0 172 30.2
PRCOL_00005653 Prasinoderma coloniale HOM05D001458 ORTHO05D006787 9.7e-14 82.0 196 31.1
Zm00001eb013040 Zea mays HOM05D001458 ORTHO05D006787 1.7e-13 81.3 169 32.0
Os03g0284800 Oryza sativa ssp. japonica HOM05D001458 ORTHO05D006787 3.7e-13 80.1 169 31.4
COL.COLO4_22276 Corchorus olitorius HOM05D001458 ORTHO05D006787 2.4e-12 77.4 169 30.8
Atru.chr8.2536 Acer truncatum HOM05D001458 ORTHO05D006787 3.1e-12 77.0 166 33.1
CDE04G2715 Ceratophyllum demersum HOM05D001458 ORTHO05D006787 5.3e-12 76.3 148 32.4
FAN19G2533 Fragaria x ananassa HOM05D001458 ORTHO05D006787 1.7e-10 71.2 136 32.4
Lj5g0003554 Lotus japonicus HOM05D001458 ORTHO05D006787 5.5e-09 66.2 143 30.8
Carub.0003s1251 Capsella rubella HOM05D001458 ORTHO05D007170 1.2e-06 58.5 227 24.2
RcHm_v2.0_Chr2g0089291 Rosa chinensis HOM05D001458 ORTHO05D020639 1.2e-06 58.5 232 25.9
COL.COLO4_22275 Corchorus olitorius HOM05D001458 ORTHO05D006787 1.5e-06 58.2 138 31.2
RcHm_v2.0_Chr5g0053841 Rosa chinensis HOM05D001458 ORTHO05D007170 2.0e-06 57.8 221 25.8
BolC1t05139H Brassica oleracea HOM05D001458 ORTHO05D007170 3.4e-06 57.0 227 24.7
RcHm_v2.0_Chr5g0010071 Rosa chinensis HOM05D001458 ORTHO05D006787 4.4e-06 56.6 230 25.2
BraA01t04073Z Brassica rapa HOM05D001458 ORTHO05D007170 5.7e-06 56.2 227 24.7
AUR62023584 Chenopodium quinoa HOM05D019590 ORTHO05D137735 5.7e-06 56.2 143 32.2


User provided reference genes

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