Gene: Cre02.g084800

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre02.g084800
  • Transcript Identifier Cre02.g084800.t1.2
  • Gene Type Coding gene
  • Location chromosome_2 : 1561073-1565992 : positive

Gene Family Information

  • ID HOM05D001458
  • #Genes/#Species 433/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre02.g084800.v5.5
  • pacid 30785864
  • alias g1565.t1

Descriptions

  • Description DNA topoisomerase VI subunit A (type IIB), involved in meiosis; homolog of eukaryotic SPO11; Chlamydomonas has at least two homologues.
  • Description DNA topoisomerase VI subunit A (type IIB)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G13170
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT5G02820
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G13170
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair Os12g0622500
GO:0034090
ISO
PLAZA Integrative Orthologymaintenance of meiotic sister chromatid cohesion AT3G13170
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT3G13170
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination Os03g0752200
GO:0000706
ISO
PLAZA Integrative Orthologymeiotic DNA double-strand break processing AT3G13170
GO:0006259
IEA
InterProDNA metabolic process
GO:0006265
IEA
InterProDNA topological change
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030957
ISO
PLAZA Integrative OrthologyTat protein binding Os12g0622500
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G02820
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Os12g0622500
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G02820
GO:0005524
IEA
InterProATP binding
GO:0003824
IEA
InterProcatalytic activity
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G02820
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002815 Spo11/DNA topoisomerase VI subunit A
IPR004085 DNA topoisomerase VI, subunit A
IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily
IPR034136 Topoisomerase 6 subunit A/Spo11, TOPRIM domain
Mapman id Description
13.2.6.1.1 Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6A