Gene: QL07p045562
General Information
Structural Information
- Species Quercus lobata
- Gene Identifier QL07p045562
- Transcript Identifier QL07p045562
- Gene Type Coding gene
- Location 7 : 45561068-45562339 : negative
Gene Family Information
- ID HOM05D001458
- #Genes/#Species 433/99
- Phylogenetic origin
- ID ORTHO05D006787
- #Genes/#Species 138/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid QL07p045562:mrna:CDS:1
- uniprot A0A7N2M7W5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006302 | ISO | PLAZA Integrative Orthology | double-strand break repair | Os12g0622500 |
| GO:0007131 | ISO | PLAZA Integrative Orthology | reciprocal meiotic recombination | Os12g0622500 |
| GO:0009957 | ISO | PLAZA Integrative Orthology | epidermal cell fate specification | AT5G02820 |
| GO:0006259 | IEA | GOA Database | DNA metabolic process | |
| GO:0006259 | IEA | InterPro | DNA metabolic process | |
| GO:0042138 | IEA | GOA Database | meiotic DNA double-strand break formation | |
| GO:0042138 | IEA | InterPro | meiotic DNA double-strand break formation | |
| GO:0006265 | IEA | GOA Database | DNA topological change | |
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003916 | IEA | GOA Database | DNA topoisomerase activity | |
| GO:0030957 | ISO | PLAZA Integrative Orthology | Tat protein binding | Os12g0622500 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | Os12g0622500 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G02820 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT5G02820 |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0003918 | IEA | GOA Database | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | |
| GO:0003918 | IEA | InterPro | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0005694 | IEA | InterPro | chromosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0009330 | IEA | GOA Database | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002815 | Spo11/DNA topoisomerase VI subunit A |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR004085 | DNA topoisomerase VI, subunit A |
| IPR036078 | Spo11/DNA topoisomerase VI subunit A superfamily |
| IPR013049 | Spo11/DNA topoisomerase VI, subunit A, N-terminal |
| IPR034136 | Topoisomerase 6 subunit A/Spo11, TOPRIM domain |
| Mapman id | Description |
|---|---|
| 13.2.6.1.1 | Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6A |