Gene: AagrBONN_evm.TU.Sc2ySwM_228.407

General Information

Structural Information

  • Species Anthoceros agrestis
  • Gene Identifier AagrBONN_evm.TU.Sc2ySwM_228.407
  • Transcript Identifier AagrBONN_evm.model.Sc2ySwM_228.407.1
  • Gene Type Coding gene
  • Location Sc2ySwM_228 : 1841199-1842527 : positive

Gene Family Information

  • ID HOM05D001458
  • #Genes/#Species 433/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name AagrBONN_EVM_Sc2ySwM_228.407

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G63990
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT5G02820
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G63990
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT1G63990
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair Os12g0622500
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT1G63990
GO:0048437
ISO
PLAZA Integrative Orthologyfloral organ development AT1G63990
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT1G63990
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination Os12g0622500
GO:0042138
IEA
InterPromeiotic DNA double-strand break formation
GO:0006265
IEA
InterProDNA topological change
GO:0006259
IEA
InterProDNA metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030957
ISO
PLAZA Integrative OrthologyTat protein binding Os12g0622500
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G63990
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity Os12g0622500
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT5G02820
GO:0003918
IEA
InterProDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005524
IEA
InterProATP binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G02820
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013049 Spo11/DNA topoisomerase VI, subunit A, N-terminal
IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily
IPR004085 DNA topoisomerase VI, subunit A
IPR034136 Topoisomerase 6 subunit A/Spo11, TOPRIM domain
IPR002815 Spo11/DNA topoisomerase VI subunit A
IPR036388 Winged helix-like DNA-binding domain superfamily
Mapman id Description
13.2.6.1.1 Cell cycle organisation.DNA replication.endoreduplication.somatic DNA topoisomerase VI complex.subunit TOP6A