Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17679 Brassica carinata HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
BcaC04g23758 Brassica carinata HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
A02p37760 Brassica napus HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
A09p04660 Brassica napus HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
C02p56860 Brassica napus HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
C09p04970 Brassica napus HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
BolC2t11755H Brassica oleracea HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
BraA02t08759Z Brassica rapa HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
BraA09t36102Z Brassica rapa HOM05D004922 ORTHO05D005990 2.6e-43 178.3 90 100.0
BolC9t53426H Brassica oleracea HOM05D004922 ORTHO05D005990 4.4e-43 177.6 90 97.8
BcaB07g30046 Brassica carinata HOM05D004922 ORTHO05D005990 7.5e-43 176.8 90 98.9
CARHR182850 Cardamine hirsuta HOM05D004922 ORTHO05D005990 7.0e-41 170.2 90 94.4
Sp2g19260 Schrenkiella parvula HOM05D004922 ORTHO05D005990 1.6e-40 169.1 90 93.3
BcaB04g19588 Brassica carinata HOM05D004922 ORTHO05D005990 2.3e-39 165.2 90 93.3
Thhalv10005202m.g Eutrema salsugineum HOM05D004922 ORTHO05D005990 3.9e-39 164.5 88 93.2
AT5G48870 Arabidopsis thaliana HOM05D004922 ORTHO05D005990 5.0e-39 164.1 88 93.2
Carub.0008s0859 Capsella rubella HOM05D004922 ORTHO05D005990 6.6e-39 163.7 88 92.0
AL8G22040 Arabidopsis lyrata HOM05D004922 ORTHO05D005990 1.9e-38 162.2 88 92.0
EL10Ac4g08876 Beta vulgaris HOM05D004922 ORTHO05D005990 7.3e-38 160.2 86 90.7
CAN.G500.78 Capsicum annuum HOM05D004922 ORTHO05D005990 7.3e-38 160.2 87 89.7
Haze_24774 Corylus avellana HOM05D004922 ORTHO05D005990 7.3e-38 160.2 86 90.7
Nitab4.5_0003904g0020 Nicotiana tabacum HOM05D004922 ORTHO05D005990 7.3e-38 160.2 86 91.9
Peaxi162Scf00122g00811 Petunia axillaris HOM05D004922 ORTHO05D005990 7.3e-38 160.2 86 90.7
Sc05g0002390 Simmondsia chinensis HOM05D004922 ORTHO05D005990 7.3e-38 160.2 86 90.7
Solyc09g091500.3 Solanum lycopersicum HOM05D004922 ORTHO05D005990 7.3e-38 160.2 87 89.7
Sopen09g034430 Solanum pennellii HOM05D004922 ORTHO05D005990 7.3e-38 160.2 87 89.7
PGSC0003DMG400029651 Solanum tuberosum HOM05D004922 ORTHO05D005990 7.3e-38 160.2 87 89.7
Ah.06g191400 Amaranthus hybridus HOM05D004922 ORTHO05D005990 1.2e-37 159.5 86 90.7
MD05G1178700 Malus domestica HOM05D004922 ORTHO05D005990 1.2e-37 159.5 86 90.7
Actinidia35950 Actinidia chinensis HOM05D004922 ORTHO05D005990 1.6e-37 159.1 86 89.5
CiPaw.03G151500 Carya illinoinensis HOM05D004922 ORTHO05D005990 1.6e-37 159.1 86 89.5
Lalb_Chr13g0291421 Lupinus albus HOM05D004922 ORTHO05D005990 1.6e-37 159.1 84 91.7
SalBow3G3780 Salvia bowleyana HOM05D004922 ORTHO05D005990 1.6e-37 159.1 86 89.5
Nn7g37520 Nelumbo nucifera HOM05D004922 ORTHO05D005990 2.1e-37 158.7 86 89.5
Migut.N00343 Erythranthe guttata HOM05D004922 ORTHO05D005990 2.8e-37 158.3 86 87.2
CSS0022478 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 88.4
CSS0038803 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 88.4
CANSAT01G0689 Cannabis sativa HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
CANSAT01G1757 Cannabis sativa HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
Dinv19219 Davidia involucrata HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
Duzib133G0821 Durio zibethinus HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
Lalb_Chr07g0188871 Lupinus albus HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
MD10G1167200 Malus domestica HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 89.5
Phvul.001G007400 Phaseolus vulgaris HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
Potri.001G277900 Populus trichocarpa HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 89.5
Potri.009G072500 Populus trichocarpa HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 89.5
RcHm_v2.0_Chr2g0121221 Rosa chinensis HOM05D004922 ORTHO05D005990 3.6e-37 157.9 84 91.7
Sabra16G0171900 Salix brachista HOM05D004922 ORTHO05D005990 3.6e-37 157.9 86 89.5
HPP92_027867 Vanilla planifolia HOM05D004922 ORTHO05D005990 3.6e-37 157.9 85 89.4
Os05g0389300 Oryza sativa ssp. japonica HOM05D004922 ORTHO05D005990 4.7e-37 157.5 88 88.6
Zm00001eb287110 Zea mays HOM05D004922 ORTHO05D005990 4.7e-37 157.5 88 88.6
Zm00001eb350780 Zea mays HOM05D004922 ORTHO05D005990 4.7e-37 157.5 88 88.6
Sed0024440 Sechium edule HOM05D004922 ORTHO05D005990 6.2e-37 157.1 84 91.7
TPR.G1594 Trifolium pratense HOM05D004922 ORTHO05D005990 6.2e-37 157.1 84 91.7
Atru.chr8.785 Acer truncatum HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
arahy.Tifrunner.gnm1.ann1.AXK6HV Arachis hypogaea HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
arahy.Tifrunner.gnm1.ann1.N94L43 Arachis hypogaea HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Ca_18278_v3 Cicer arietinum L. HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
COL.COLO4_37469 Corchorus olitorius HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Dinv04668 Davidia involucrata HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Duzib138G1451 Durio zibethinus HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Gohir.A11G136000 Gossypium hirsutum HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Hma1.2p1_1061F.1_g253320 Hydrangea macrophylla HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Manes.12G042100 Manihot esculenta HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Manes.13G044200 Manihot esculenta HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Medtr4g094600 Medicago truncatula HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Phvul.002G196500 Phaseolus vulgaris HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Psat7g092040 Pisum sativum HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
PGR044G2430 Punica granatum HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
QL09p007931 Quercus lobata HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
QL09p044611 Quercus lobata HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Sed0006654 Sechium edule HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
THA.LOC104818942 Tarenaya hassleriana HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
THA.LOC104827350 Tarenaya hassleriana HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
Thecc.01G228800 Theobroma cacao HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
TPR.G4933 Trifolium pratense HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
TWI09G0408 Tripterygium wilfordii HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
TWI59G0402 Tripterygium wilfordii HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
TAR365G0710 Trochodendron aralioides HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
TAR636G3017 Trochodendron aralioides HOM05D004922 ORTHO05D005990 8.0e-37 156.8 84 90.5
ClCG07G001790 Citrullus lanatus HOM05D004922 ORTHO05D005990 1.1e-36 156.4 84 89.3
Glyma.05G127900 Glycine max HOM05D004922 ORTHO05D005990 1.1e-36 156.4 84 90.5
PSO210G2196 Papaver somniferum HOM05D004922 ORTHO05D005990 1.1e-36 156.4 84 91.7
PSO591G0020 Papaver somniferum HOM05D004922 ORTHO05D005990 1.1e-36 156.4 84 91.7
PSO832G2289 Papaver somniferum HOM05D004922 ORTHO05D005990 1.1e-36 156.4 84 91.7
Ciclev10022785m.g Citrus clementina HOM05D004922 ORTHO05D005990 1.4e-36 156.0 84 90.5
ECA236G1627 Erigeron canadensis HOM05D004922 ORTHO05D005990 1.4e-36 156.0 84 90.5
Prupe.8G205100 Prunus persica HOM05D004922 ORTHO05D005990 1.4e-36 156.0 84 90.5
Cc01_g17260 Coffea canephora HOM05D004922 ORTHO05D005990 1.8e-36 155.6 84 89.3
Eucgr.H03678 Eucalyptus grandis HOM05D004922 ORTHO05D005990 1.8e-36 155.6 84 89.3
FvH4_1g24390 Fragaria vesca HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
FAN19G2048 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
FAN23G2197 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
FAN28G0422 Fragaria x ananassa HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
Gohir.A07G155600 Gossypium hirsutum HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
Gohir.D11G142400 Gossypium hirsutum HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
Gorai.001G185300 Gossypium raimondii HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
Gorai.007G152700 Gossypium raimondii HOM05D004922 ORTHO05D005990 2.3e-36 155.2 84 89.3
CDE02G4734 Ceratophyllum demersum HOM05D004922 ORTHO05D005990 3.1e-36 154.8 84 89.3
Gohir.D07G162000 Gossypium hirsutum HOM05D004922 ORTHO05D005990 3.1e-36 154.8 84 88.1
Lj4g0004779 Lotus japonicus HOM05D004922 ORTHO05D005990 3.1e-36 154.8 84 89.3
Nitab4.5_0002920g0030 Nicotiana tabacum HOM05D004922 ORTHO05D005990 3.1e-36 154.8 83 92.8
Pp3c1_36020 Physcomitrium patens HOM05D004922 ORTHO05D005990 3.1e-36 154.8 86 87.2
Aqoxy1G00374 Aquilegia oxysepala HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 90.5
MELO3C018062.2 Cucumis melo HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 89.3
CsaV3_3G028790 Cucumis sativus L. HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 89.3
SMO118G0467 Selaginella moellendorffii HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 89.3
SEGI_22867 Sequoiadendron giganteum HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 89.3
GSVIVG01029076001 Vitis vinifera HOM05D004922 ORTHO05D005990 4.0e-36 154.5 84 89.3
HanXRQChr04g0110651 Helianthus annuus HOM05D004922 ORTHO05D005990 5.2e-36 154.1 84 89.3
HanXRQChr10g0287281 Helianthus annuus HOM05D004922 ORTHO05D005990 5.2e-36 154.1 84 89.3
Lsat_1_v5_gn_8_90161 Lactuca sativa HOM05D004922 ORTHO05D005990 5.2e-36 154.1 84 89.3
Lalb_Chr11g0067741 Lupinus albus HOM05D004922 ORTHO05D005990 5.2e-36 154.1 84 88.1
Migut.D00519 Erythranthe guttata HOM05D004922 ORTHO05D005990 8.9e-36 153.3 84 88.1
CSS0043203 Camellia sinensis var. sinensis HOM05D004922 ORTHO05D005990 1.2e-35 152.9 84 89.3
Mapoly0016s0054 Marchantia polymorpha HOM05D004922 ORTHO05D005990 4.4e-35 151.0 84 86.9
AagrBONN_evm.TU.Sc2ySwM_228.5635 Anthoceros agrestis HOM05D004922 ORTHO05D005990 9.8e-35 149.8 84 86.9
unitig_22.g5302 Utricularia gibba HOM05D004922 ORTHO05D005990 2.9e-34 148.3 84 84.5
Sabra09G0054700 Salix brachista HOM05D004922 ORTHO05D005990 8.3e-34 146.7 83 88.0
DCAR_000537 Daucus carota HOM05D004922 ORTHO05D005990 1.1e-33 146.4 97 78.4
Aa31LG5G17580 Aethionema arabicum HOM05D004922 ORTHO05D005990 1.9e-33 145.6 79 91.1
CiPaw.04G107000 Carya illinoinensis HOM05D004922 ORTHO05D005990 1.9e-33 145.6 79 91.1
Peaxi162Scf00047g01222 Petunia axillaris HOM05D004922 ORTHO05D005990 4.1e-33 144.4 79 89.9
MCO15G079 Micromonas commoda HOM05D004922 ORTHO05D005990 7.0e-33 143.7 85 78.8
Glyma.08G082700 Glycine max HOM05D004922 ORTHO05D005990 9.2e-33 143.3 77 92.2
Rhsim02G0053600 Rhododendron simsii HOM05D004922 ORTHO05D005990 2.1e-32 142.1 79 88.6
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 2.7e-32 141.7 81 85.2
Cpa.g.sc3.67 Carica papaya HOM05D004922 ORTHO05D005990 1.3e-31 139.4 76 89.5
FAN26G0321 Fragaria x ananassa HOM05D004922 ORTHO05D005990 1.7e-31 139.0 76 89.5
FAN26G0401 Fragaria x ananassa HOM05D004922 ORTHO05D005990 1.7e-31 139.0 76 89.5
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 6.6e-31 137.1 74 89.2
PRCOL_00003510 Prasinoderma coloniale HOM05D004922 ORTHO05D005990 4.3e-30 134.4 85 70.6
HPP92_006337 Vanilla planifolia HOM05D004922 ORTHO05D005990 1.2e-27 126.3 85 75.3
Actinidia39954 Actinidia chinensis HOM05D004922 ORTHO05D005990 1.1e-25 119.8 87 77.0
AUR62033984 Chenopodium quinoa HOM05D004922 ORTHO05D005990 4.6e-24 114.4 60 90.0
SGA_v2.0_scaffold8G04653 Striga asiatica HOM05D004922 ORTHO05D005990 7.8e-24 113.6 107 59.8
CDE05G0301 Ceratophyllum demersum HOM05D004922 ORTHO05D005990 8.6e-23 110.2 58 93.1
Haze_26353 Corylus avellana HOM05D004922 ORTHO05D005990 1.9e-22 109.0 77 59.7
HanXRQChr11g0331491 Helianthus annuus HOM05D004922 ORTHO05D005990 6.2e-21 104.0 64 84.4
CARHR182860 Cardamine hirsuta HOM05D004922 ORTHO05D005990 1.1e-20 103.2 78 74.4
Oeu016707.1 Olea europaea HOM05D004922 ORTHO05D005990 1.2e-19 99.8 53 92.5
DCAR_023130 Daucus carota HOM05D004922 ORTHO05D005990 2.6e-19 98.6 53 90.6
MD00G1053800 Malus domestica HOM05D004922 ORTHO05D005990 1.3e-18 96.3 53 86.8
MD10G1019300 Malus domestica HOM05D004922 ORTHO05D005990 1.7e-18 95.9 53 88.7
ATR0580G296 Amborella trichopoda HOM05D004922 ORTHO05D005990 2.2e-18 95.5 53 88.7
Hund05521 Selenicereus undatus HOM05D004922 ORTHO05D005990 8.4e-18 93.6 50 92.0
Atru.chr10.1425 Acer truncatum HOM05D004922 ORTHO05D005990 2.7e-16 88.6 51 84.3
TPR.G35576 Trifolium pratense HOM05D004922 ORTHO05D005990 3.4e-11 71.6 84 48.8
EL10Ac1g01454 Beta vulgaris HOM05D004922 ORTHO05D005990 6.0e-08 60.8 31 93.5
QL01p002563 Quercus lobata HOM05D004922 ORTHO05D005990 1.1e-06 56.6 32 78.1


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