Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI007G16960
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI007G16960 SI001G24860 | 2 |  |
| Orthologous gene family | SI007G16960 | 1 | ||
| Anchor point | SI001G24860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI007G16960 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT1G02205 AT5G57800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G02205 | 1 | ||
| Brachypodium distachyon | Tree-based ortholog | many-to-many | BD3G28450 BD3G48997 BD5G15480 | 3 | |
| Anchor point | 1-to-many | BD3G48997 BD5G15480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD5G15480 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-many | CP00041G00390 CP02179G00010 CP00041G00420 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00041G00390 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | many-to-many | HV38844G00010 HV1561645G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV61204G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | many-to-many | MA00G24350 MA11G21980 MA01G21160 ... | 9 | |
| Anchor point | 1-to-1 | MA11G17800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA01G21160 | 1 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | many-to-many | OSINDICA_04G35400 OSINDICA_02G39530 | 2 | |
| Anchor point | 1-to-many | OSINDICA_04G35400 OSINDICA_02G39530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_10G23840 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS02G40784 OS04G43270 | 2 | |
| Anchor point | 1-to-many | OS04G43270 OS02G40784 OS10G33250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G40784 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL11G00750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G00750 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00364G00120 PP00022G00850 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00364G00120 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT14G18030 PT14G15230 PT14G15260 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G15260 PT14G18030 PT14G15290 ... | 4 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL01G088430 SL01G088410 SL01G088400 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL01G088400 SL03G065250 SL12G100270 ... | 4 | ||
| Sorghum bicolor | Tree-based ortholog | many-to-many | SB04G026320 SB06G022320 | 2 | |
| Anchor point | 1-to-many | SB06G022320 SB04G026320 SB01G019590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB06G022320 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV15G03930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV15G03990 VV15G04000 VV15G02110 ... | 4 | ||
| Zea mays | Tree-based ortholog | many-to-1 | ZM05G34020 | 1 | |
| Anchor point | 1-to-1 | ZM05G34020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G34020 | 1 |