PLAZA 3.0 Monocots gene overview : AT5G57800

Gene: AT5G57800 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G57800
Transcript Identifier: AT5G57800.1
Gene Type: Coding gene
Location: 5 : 23420589-23423832 : positive

Family

Gene family: HOM03M000542
(121 genes in 15 species)
specific family

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Descriptions

Description: Fatty acid hydroxylase superfamily

Curated Summary: encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.

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Identifiers

Identifier	Name
alias	CER3
alias	FACELESS POLLEN 1
alias	FLP1
alias	ECERIFERUM 3
alias	WAX2
alias	YRE
uniprot	Q8H1Z0

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010025	IMP	UniProt	wax biosynthetic process	1 2 3 4 5 6 7 8 9 10 11
GO:0042335	IMP, RCA	Gene Ontology	cuticle development	1 2
GO:0048235	IMP	UniProt	pollen sperm cell differentiation	1 2 3 4 5 6 7 8 9 10 11
GO:0006723	IMP	UniProt	cuticle hydrocarbon biosynthetic process	1 2 3 4 5 6 7 8 9 10 11
GO:0000038	RCA	Gene Ontology	very long-chain fatty acid metabolic process	1
GO:0043447	IDA	UniProt	alkane biosynthetic process	1 2 3 4 5 6 7 8 9 10 11
GO:0006633	IEA	UniProt	fatty acid biosynthetic process	1 2 3 4 5 6 7 8 9 10
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003824	ISS	Gene Ontology	catalytic activity	1
GO:0005506	IEA	UniProt	iron ion binding	1 2 3 4 5 6 7 8 9 10
GO:0016491	IEA	UniProt	oxidoreductase activity	1 2 3 4 5 6 7 8 9 10

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	ISS	Gene Ontology	membrane	1
GO:0005886	IDA	UniProt	plasma membrane	1 2 3 4 5 6 7 8 9 10 11
GO:0005789	IEA	UniProt	endoplasmic reticulum membrane	1 2 3 4 5 6 7 8 9 10
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016040	NAD(P)-binding domain
IPR006694	Fatty acid hydroxylase
IPR021940	Uncharacterised domain Wax2, C-terminal

Mapman id	Description
16.7	secondary metabolism.wax

No SignalP domains detected for this gene.