Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI003G19470
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI003G19470 | 1 |  |
| Orthologous gene family | SI003G19470 | 1 | ||
| Anchor point | SI005G35640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI003G19470 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT1G16420 AT1G79310 AT1G79320 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT1G79340 AT1G79330 | 2 | ||
| Brachypodium distachyon | Tree-based ortholog | 1-to-many | BD2G21110 BD2G21100 | 2 | |
| Anchor point | 1-to-many | BD2G52470 BD2G21100 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G21100 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00032G01210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00032G01210 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G09540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G09540 | 1 | ||
| Hordeum vulgare | Tree-based ortholog | 1-to-1 | HV57468G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV57468G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | 1-to-many | MA09G11670 MA07G00380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA07G00380 MA09G11670 | 2 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | 1-to-many | OSINDICA_05G37490 OSINDICA_05G37500 | 2 | |
| Anchor point | 1-to-many | OSINDICA_01G55550 OSINDICA_05G37490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_05G37500 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G41660 OS05G41670 | 2 | |
| Anchor point | 1-to-many | OS05G41660 OS01G58580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G41670 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00165G00340 PP00043G01050 PP00373G00140 ... | 5 | |
| Orthologous gene family | 1-to-many | PP00043G01050 PP00165G00340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00043G01050 PP00165G00340 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G08110 PT10G17500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G17500 PT08G08110 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G098150 | 1 | |
| Orthologous gene family | 1-to-1 | SL09G098150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G098150 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | 1-to-1 | SB08G019262 | 1 | |
| Anchor point | 1-to-many | SB03G037160 SB09G024350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB09G024370 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G09420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G09420 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM08G18710 | 1 | |
| Orthologous gene family | 1-to-1 | ZM08G18710 | 1 | ||
| Anchor point | 1-to-many | ZM03G29460 ZM08G18710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G18710 | 1 |