Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
SI002G03430
(Setaria italica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Setaria italica | Tree-based ortholog | SI002G03430 | 1 |  |
| Orthologous gene family | SI002G03430 | 1 | ||
| Anchor point | SI009G16020 SI003G40250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | SI002G03430 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT1G30100 AT4G18350 AT3G14440 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G78390 | 1 | ||
| Brachypodium distachyon | Tree-based ortholog | 1-to-1 | BD1G58580 | 1 | |
| Anchor point | many-to-many | BD1G58580 BD1G13760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G58580 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00246G00030 CP00077G01030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00077G01030 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR08G02440 CR03G01920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR08G02440 CR03G01920 | 2 | ||
| Hordeum vulgare | Tree-based ortholog | 1-to-many | HV1580042G00010 HV273294G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV273294G00010 | 1 | ||
| Musa acuminata | Tree-based ortholog | 1-to-many | MA04G32390 MA05G02670 MA04G23520 ... | 6 | |
| Anchor point | many-to-many | MA04G32390 MA07G01270 MA04G23520 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA02G13190 MA04G23520 MA04G32390 ... | 6 | ||
| Oryza sativa ssp. indica | Tree-based ortholog | 1-to-1 | OSINDICA_07G04570 | 1 | |
| Anchor point | many-to-many | OSINDICA_03G42720 OSINDICA_07G04570 OSINDICA_12G30400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G42720 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G05940 | 1 | |
| Anchor point | many-to-many | OS07G05940 OS03G44380 OS12G42280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G05940 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL01G01900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G02010 OL02G02020 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00081G00020 PP00412G00030 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00081G00020 PP00412G00030 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT09G15200 PT09G15180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G11240 PT01G39380 | 2 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL08G016720 SL07G056570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G056570 | 1 | ||
| Sorghum bicolor | Tree-based ortholog | 1-to-many | SB02G003240 SB02G003230 | 2 | |
| Anchor point | many-to-many | SB01G013520 SB02G003230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB02G003230 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV10G04440 VV19G11960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G09670 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM07G01910 ZM07G31250 ZM02G46820 | 3 | |
| Anchor point | many-to-many | ZM07G01910 ZM02G46820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G46820 ZM07G01910 | 2 |