Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PT11G16990
(Populus trichocarpa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Populus trichocarpa | Orthologous gene family | PT11G16990 | 1 |  |
| Anchor point | PT01G47300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | PT11G16990 | 1 | ||
| Tree-based ortholog | PT01G47300 PT11G16990 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G26430 | 1 | |
| Anchor point | 1-to-many | AT5G56280 AT4G26430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT5G56280 AT4G26430 | 2 | ||
| Tree-based ortholog | many-to-1 | AT4G26430 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | 1-to-1 | BD3G39500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G39500 | 1 | ||
| Tree-based ortholog | many-to-1 | BD3G39500 | 1 | ||
| Carica papaya | Anchor point | 1-to-1 | CP00012G00560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G00560 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR11G01230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G01230 | 1 | ||
| Tree-based ortholog | many-to-many | CR11G01210 CR11G01230 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV91932G00010 | 1 | |
| Musa acuminata | Orthologous gene family | 1-to-1 | MA05G04280 | 1 | |
| Anchor point | 1-to-1 | MA05G04280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA05G04280 | 1 | ||
| Tree-based ortholog | many-to-1 | MA05G04280 | 1 | ||
| Oryza sativa ssp. indica | Anchor point | 1-to-1 | OSINDICA_08G37430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_08G37430 | 1 | ||
| Tree-based ortholog | many-to-1 | OSINDICA_12G30930 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | 1-to-1 | OS08G39070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G39070 | 1 | ||
| Tree-based ortholog | many-to-many | OS12G42810 OS12G42730 | 2 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G03850 | 1 | |
| Tree-based ortholog | many-to-1 | OL06G00900 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00034G02360 | 1 | |
| Setaria italica | Orthologous gene family | 1-to-1 | SI006G19770 | 1 | |
| Anchor point | 1-to-1 | SI006G19770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI006G19770 | 1 | ||
| Tree-based ortholog | many-to-1 | SI006G19770 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL10G005660 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005660 | 1 | ||
| Sorghum bicolor | Anchor point | 1-to-1 | SB07G028380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G028380 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G06960 | 1 | |
| Zea mays | Orthologous gene family | 1-to-many | ZM01G31520 ZM04G31930 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G31520 | 1 | ||
| Tree-based ortholog | many-to-many | ZM04G31930 ZM01G31520 | 2 |