Gene: AT5G56280 (Arabidopsis thaliana)

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Gene Identifier
AT5G56280
Transcript Identifier
AT5G56280.1
Gene Type
Coding gene
Location
5 : 22783617-22785530 : negative

Family

Gene family
HOM03M003255
(27 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
COP9 signalosome subunit 6A
Curated Summary
one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.
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Identifiers

Identifier Name
aliasCSN6A
aliasCOP9 signalosome subunit 6A
uniprotQ8W206

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030163TASGene Ontologyprotein catabolic process1
GO:0009640RCA, TASGene Ontologyphotomorphogenesis1 2
GO:0006511IMPUniProtubiquitin-dependent protein catabolic process1 2 3 4 5 6
GO:0007275IMPUniProtmulticellular organismal development1 2 3 4 5 6
GO:0010387IMPUniProtCOP9 signalosome assembly1 2 3 4 5 6
GO:0009165RCAGene Ontologynucleotide biosynthetic process1
GO:0010388RCAGene Ontologycullin deneddylation1
GO:0043161RCAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0043248RCAGene Ontologyproteasome assembly1
GO:0051788RCAGene Ontologyresponse to misfolded protein1
GO:0009585IEAUniProtred, far-red light phototransduction1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634TASGene Ontologynucleus1
GO:0008180IPI, TAS, UniProtCOP9 signalosome1 2 3 4 5 6 7
GO:0005737IEAUniProtcytoplasm1 2 3 4 5

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000555JAB/MPN domain
IPR024969Rpn11/EIF3F C-terminal domain

Mapman id Description
30.11.1signalling.light.COP9 signalosome
33.99development.unspecified
No SignalP domains detected for this gene.