Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00075G00720
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00075G00720 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | CP00075G00720 | 1 | ||
| Tree-based ortholog | CP33360G00010 CP00075G00720 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G52740 | 1 | |
| Tree-based ortholog | many-to-1 | AT4G13570 | 1 | ||
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD1G09060 | 1 | |
| Tree-based ortholog | many-to-many | BD1G09060 BD3G26880 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G01430 | 1 | |
| Tree-based ortholog | many-to-1 | CR13G01430 | 1 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV442208G00010 | 1 | |
| Tree-based ortholog | many-to-many | HV442208G00010 HV49487G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MA01G28350 MA06G23980 MA01G04880 ... | 4 | |
| Tree-based ortholog | many-to-many | MA10G21310 MA06G23980 MA01G28350 ... | 7 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_03G05760 | 1 | |
| Tree-based ortholog | many-to-many | OSINDICA_10G18840 OSINDICA_03G05760 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G06670 | 1 | |
| Tree-based ortholog | many-to-many | OS03G53190 OS10G28230 OS03G06670 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G04510 | 1 | |
| Tree-based ortholog | many-to-1 | OL02G04510 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00376G00140 PP00219G00210 PP00046G01080 | 3 | |
| Tree-based ortholog | many-to-many | PP00219G00210 PP00046G01080 PP00376G00140 | 3 | ||
| Populus trichocarpa | Anchor point | N/A | PT06G24930 PT18G03200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT18G03210 PT06G24930 PT06G24940 ... | 4 | ||
| Tree-based ortholog | many-to-many | PT06G24930 PT06G24940 PT18G03200 ... | 6 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI009G54750 | 1 | |
| Tree-based ortholog | many-to-many | SI009G54750 SI001G14370 | 2 | ||
| Solanum lycopersicum | Anchor point | N/A | SL12G006830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G006830 | 1 | ||
| Tree-based ortholog | many-to-many | SL12G006830 SL06G084090 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB04G025140 | 1 | |
| Tree-based ortholog | many-to-1 | SB05G006690 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G11410 | 1 | |
| Tree-based ortholog | many-to-many | VV04G11410 VV09G06130 VV00G05010 | 3 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G04370 | 1 | |
| Tree-based ortholog | many-to-many | ZM01G04490 ZM08G12010 | 2 |