Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT5G12250
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT5G12250 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT5G12250 | 1 | ||
| Tree-based ortholog | AT5G12250 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD2G21340 | 1 | |
| Tree-based ortholog | 1-to-1 | BD2G21340 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | CP39949G00010 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G15170 CR12G16830 | 2 | |
| Tree-based ortholog | 1-to-many | CR12G15170 CR12G16830 | 2 | ||
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV51396G00010 | 1 | |
| Tree-based ortholog | 1-to-many | HV66163G00010 HV51396G00010 | 2 | ||
| Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA04G12390 | 1 | |
| Tree-based ortholog | 1-to-1 | MA10G12890 | 1 | ||
| Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_01G17180 | 1 | |
| Tree-based ortholog | 1-to-many | OSINDICA_06G41990 OSINDICA_03G54060 OSINDICA_02G06820 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G18050 | 1 | |
| Tree-based ortholog | 1-to-many | OS06G46000 OS03G56810 OS02G07060 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | |
| Tree-based ortholog | 1-to-many | OL01G02190 OL01G04460 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00252G00310 PP00093G00690 PP00218G00030 ... | 6 | |
| Tree-based ortholog | 1-to-many | PP00252G00350 PP00093G00830 PP00218G00030 ... | 11 | ||
| Populus trichocarpa | Anchor point | N/A | PT09G06710 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G03320 | 1 | ||
| Tree-based ortholog | 1-to-many | PT16G03320 PT01G27270 PT01G27280 | 3 | ||
| Setaria italica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI003G24570 | 1 | |
| Tree-based ortholog | 1-to-many | SI009G06650 SI001G07840 SI004G27280 | 3 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080940 | 1 | |
| Tree-based ortholog | 1-to-many | SL03G118760 SL03G025730 | 2 | ||
| Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB03G037490 | 1 | |
| Tree-based ortholog | 1-to-many | SB04G004520 SB01G006310 SB10G027010 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | |
| Tree-based ortholog | 1-to-1 | VV10G05850 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G29180 ZM08G00330 | 2 | |
| Tree-based ortholog | 1-to-many | ZM05G03210 ZM01G52790 ZM05G20150 ... | 4 |