Integrative Orthology Viewer: AT3G47950 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT3G47950 | 1 | |
Anchor point | AT5G62670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT3G47950 AT5G62670 | 2 | ||
Tree-based ortholog | AT3G47950 AT5G62670 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G00517 | 1 | |
Tree-based ortholog | many-to-many | BD1G54847 BD4G00517 BD1G12117 | 3 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00046G01110 CP00017G01720 | 2 | |
Tree-based ortholog | many-to-1 | CP00017G01720 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR10G09010 | 1 | |
Tree-based ortholog | many-to-1 | CR10G09010 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV1557936G00010 | 1 | |
Tree-based ortholog | many-to-many | HV1557936G00010 HV37907G00010 | 2 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA04G22920 MA04G22930 | 2 | |
Tree-based ortholog | many-to-many | MA04G22930 MA04G22920 MA09G11200 | 3 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_03G46560 | 1 | |
Tree-based ortholog | many-to-many | OSINDICA_07G07630 OSINDICA_12G32080 OSINDICA_03G46560 | 3 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS12G44150 | 1 | |
Tree-based ortholog | many-to-many | OS07G09340 OS12G44150 OS03G48310 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL06G01340 | 1 | |
Tree-based ortholog | many-to-many | OL06G01340 OL19G00320 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00133G00100 PP00321G00060 PP00006G00020 ... | 5 | |
Tree-based ortholog | many-to-1 | PP00136G00790 | 1 | ||
Populus trichocarpa | Anchor point | 1-to-1 | PT15G06600 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT12G07160 PT15G06600 | 2 | ||
Tree-based ortholog | many-to-many | PT12G07160 PT15G06600 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI003G41850 | 1 | |
Tree-based ortholog | many-to-many | SI002G06670 SI003G41850 SI009G13540 | 3 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL03G113400 SL06G071100 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G113400 SL06G071100 | 2 | ||
Tree-based ortholog | many-to-many | SL03G113400 SL06G071100 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SB08G023070 | 1 | |
Tree-based ortholog | many-to-many | SB02G005440 SB08G023070 SB01G011610 | 3 | ||
Vitis vinifera | Anchor point | 1-to-many | VV14G12730 VV17G04320 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV17G04320 | 1 | ||
Tree-based ortholog | many-to-many | VV17G04320 VV14G12730 | 2 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM03G13980 | 1 | |
Tree-based ortholog | many-to-many | ZM02G45970 ZM07G03900 ZM07G19030 ... | 5 |