PLAZA 3.0 Monocots gene overview : AT3G47950

Gene: AT3G47950 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G47950
Transcript Identifier: AT3G47950.1
Gene Type: Coding gene
Location: 3 : 17693015-17697801 : positive

Family

Gene family: HOM03M000298
(184 genes in 16 species)
specific family
Duplication type: Block duplicate

Loading...please wait

Descriptions

Description: H(+)-ATPase 4

Curated Summary: mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase

Identifiers

Identifier	Name
alias	H(+)-ATPase 4
alias	HA4
alias	AHA4
uniprot	Q9SU58

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009651	IMP	UniProt	response to salt stress	1 2 3 4 5
GO:0007059	RCA	Gene Ontology	chromosome segregation	1
GO:0007062	RCA	Gene Ontology	sister chromatid cohesion	1
GO:0007129	RCA	Gene Ontology	synapsis	1
GO:0007131	RCA	Gene Ontology	reciprocal meiotic recombination	1
GO:0010089	RCA	Gene Ontology	xylem development	1
GO:0033044	RCA	Gene Ontology	regulation of chromosome organization	1
GO:0042138	RCA	Gene Ontology	meiotic DNA double-strand break formation	1
GO:0044036	RCA	Gene Ontology	cell wall macromolecule metabolic process	1
GO:0045132	RCA	Gene Ontology	meiotic chromosome segregation	1
GO:0006754	IEA	UniProt	ATP biosynthetic process	1 2 3 4
GO:0006200	IEA	InterPro	ATP catabolic process
GO:0006812	IEA	InterPro	cation transport
GO:0046129	IEA	PLAZA Homology	purine ribonucleoside biosynthetic process	HOM03M000298
GO:0009201	IEA	PLAZA Homology	ribonucleoside triphosphate biosynthetic process	HOM03M000298
GO:0009206	IEA	PLAZA Homology	purine ribonucleoside triphosphate biosynthetic process	HOM03M000298
GO:0042455	IEA	PLAZA Homology	ribonucleoside biosynthetic process	HOM03M000298
GO:0042451	IEA	PLAZA Homology	purine nucleoside biosynthetic process	HOM03M000298
GO:0009260	IEA	PLAZA Homology	ribonucleotide biosynthetic process	HOM03M000298
GO:0009123	IEA	PLAZA Homology	nucleoside monophosphate metabolic process	HOM03M000298
GO:0009124	IEA	PLAZA Homology	nucleoside monophosphate biosynthetic process	HOM03M000298
GO:0009125	IEA	PLAZA Homology	nucleoside monophosphate catabolic process	HOM03M000298
GO:0009126	IEA	PLAZA Homology	purine nucleoside monophosphate metabolic process	HOM03M000298
GO:0009127	IEA	PLAZA Homology	purine nucleoside monophosphate biosynthetic process	HOM03M000298
GO:0009128	IEA	PLAZA Homology	purine nucleoside monophosphate catabolic process	HOM03M000298
GO:0046390	IEA	PLAZA Homology	ribose phosphate biosynthetic process	HOM03M000298
GO:0072522	IEA	PLAZA Homology	purine-containing compound biosynthetic process	HOM03M000298
GO:0006164	IEA	PLAZA Homology	purine nucleotide biosynthetic process	HOM03M000298
GO:0009145	IEA	PLAZA Homology	purine nucleoside triphosphate biosynthetic process	HOM03M000298
GO:0009142	IEA	PLAZA Homology	nucleoside triphosphate biosynthetic process	HOM03M000298
GO:0046034	IEA	PLAZA Homology	ATP metabolic process	HOM03M000298
GO:1901659	IEA	PLAZA Homology	glycosyl compound biosynthetic process	HOM03M000298
GO:0009169	IEA	PLAZA Homology	purine ribonucleoside monophosphate catabolic process	HOM03M000298
GO:0009168	IEA	PLAZA Homology	purine ribonucleoside monophosphate biosynthetic process	HOM03M000298
GO:0009163	IEA	PLAZA Homology	nucleoside biosynthetic process	HOM03M000298
GO:0009161	IEA	PLAZA Homology	ribonucleoside monophosphate metabolic process	HOM03M000298
GO:0009167	IEA	PLAZA Homology	purine ribonucleoside monophosphate metabolic process	HOM03M000298
GO:0009158	IEA	PLAZA Homology	ribonucleoside monophosphate catabolic process	HOM03M000298
GO:0009152	IEA	PLAZA Homology	purine ribonucleotide biosynthetic process	HOM03M000298
GO:0009156	IEA	PLAZA Homology	ribonucleoside monophosphate biosynthetic process	HOM03M000298

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016887	ISS, IEA	Gene Ontology	ATPase activity	1
GO:0008553	ISS	UniProt	hydrogen-exporting ATPase activity, phosphorylative mechanism	1 2 3 4 5
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4
GO:0046872	IEA	UniProt	metal ion binding	1 2 3 4
GO:0019829	IEA	InterPro	cation-transporting ATPase activity
GO:0000166	IEA	InterPro	nucleotide binding
GO:0016820	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	HOM03M000298
GO:0042626	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of substances	HOM03M000298
GO:0042625	IEA	PLAZA Homology	ATPase activity, coupled to transmembrane movement of ions	HOM03M000298
GO:1901265	IEA	PLAZA Homology	nucleoside phosphate binding	HOM03M000298
GO:0015399	IEA	PLAZA Homology	primary active transmembrane transporter activity	HOM03M000298
GO:0015405	IEA	PLAZA Homology	P-P-bond-hydrolysis-driven transmembrane transporter activity	HOM03M000298
GO:0043492	IEA	PLAZA Homology	ATPase activity, coupled to movement of substances	HOM03M000298

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	IDA, ISM,	UniProt	plasma membrane	1 2 3 4 5 6
GO:0016021	IEA	UniProt	integral to membrane	1 2 3 4

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR004014	Cation-transporting P-type ATPase, N-terminal
IPR001757	Cation-transporting P-type ATPase
IPR008250	P-type ATPase, A domain
IPR023214	HAD-like domain
IPR018303	P-type ATPase, phosphorylation site
IPR023298	P-type ATPase, transmembrane domain
IPR006534	H+ transporting P-type ATPase, subfamily IIIA
IPR023299	P-type ATPase, cytoplasmic domain N

Mapman id	Description
34.1	transport.p- and v-ATPases

No SignalP domains detected for this gene.