Functional clusters
Information
- Type
- Mapman term
- Identifier
- 9.4
- Description
- mitochondrial electron transport / ATP synthesis.alternative oxidase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_3 | 17 | CH_aly_104 | 2 | 2 | 0.000631373 |
Arabidopsis thaliana | 3 | 17 | CH_ath_379 | 2 | 2 | 0.000595203 |
Citrus sinensis | scaffold00149 | 17 | CH_csi_166 | 2 | 2 | 0.000116768 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_468 | 3 | 5 | 0.000000206212 |
Glycine max | Gm05 | 17 | CH_gma_428 | 2 | 2 | 0.000370872 |
Glycine max | Gm08 | 17 | CH_gma_429 | 2 | 2 | 0.000370872 |
Gossypium raimondii | Chr05 | 17 | CH_gra_312 | 2 | 2 | 0.000321664 |
Populus trichocarpa | Chr12 | 17 | CH_ptr_412 | 2 | 2 | 0.000299888 |
Prunus persica | scaffold_1 | 17 | CH_ppe_195 | 3 | 4 | 0.000000124707 |
Solanum lycopersicum | ch08 | 17 | CH_sly_414 | 2 | 2 | 0.000345552 |
Vitis vinifera | chr2 | 17 | CH_vvi_422 | 2 | 3 | 0.000684523 |
Zea mays | 2 | 17 | CH_zma_57 | 3 | 3 | 0.0000000151759 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |