Functional clusters
Information
- Type
- Mapman term
- Identifier
- 34.12
- Description
- transport.metal
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 3 | 17 | CH_ath_210 | 4 | 4 | 0.00000238148 |
Brassica rapa | A01 | 17 | CH_bra_69 | 5 | 5 | 0.0000000364943 |
Citrus sinensis | scaffold00021 | 17 | CH_csi_74 | 5 | 6 | 0.000000326507 |
Citrus sinensis | scaffold00026 | 17 | CH_csi_120 | 4 | 4 | 0.0000111397 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_494 | 5 | 6 | 0.000000382288 |
Eucalyptus grandis | scaffold_1 | 17 | CH_egr_629 | 4 | 4 | 0.0000143519 |
Eucalyptus grandis | scaffold_10 | 17 | CH_egr_378 | 6 | 8 | 0.00000000786693 |
Eucalyptus grandis | scaffold_11 | 17 | CH_egr_424 | 5 | 5 | 0.0000000639525 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_261 | 7 | 9 | 0.000000000044476 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_270 | 12 | 80 | 0.0000000000853461 |
Eucalyptus grandis | scaffold_5 | 17 | CH_egr_377 | 6 | 8 | 0.00000000786693 |
Eucalyptus grandis | scaffold_7 | 17 | CH_egr_635 | 5 | 10 | 0.0000158187 |
Eucalyptus grandis | scaffold_10 | 18 | CH_egr_262 | 11 | 218 | 0.000197598 |
Eucalyptus grandis | scaffold_5 | 18 | CH_egr_136 | 14 | 83 | 0.00000000000007564 |
Glycine max | Gm09 | 17 | CH_gma_206 | 5 | 7 | 0.000000850678 |
Gossypium raimondii | Chr04 | 17 | CH_gra_117 | 5 | 5 | 0.0000000223027 |
Malus domestica | 1 | 17 | CH_mdo_276 | 4 | 9 | 0.00045759 |
Malus domestica | 5 | 17 | CH_mdo_304 | 4 | 10 | 0.000760817 |
Malus domestica | 5 | 18 | CH_mdo_24 | 10 | 184 | 0.0000138223 |
Manihot esculenta | scaffold08316 | 17 | CH_mes_244 | 3 | 3 | 0.000626308 |
Populus trichocarpa | Chr01 | 17 | CH_ptr_179 | 5 | 5 | 0.000000033782 |
Populus trichocarpa | Chr10 | 17 | CH_ptr_252 | 5 | 8 | 0.00000187386 |
Populus trichocarpa | Chr10 | 18 | CH_ptr_86 | 10 | 119 | 0.0000017873 |
Prunus persica | scaffold_2 | 17 | CH_ppe_205 | 6 | 14 | 0.000000245397 |
Prunus persica | scaffold_4 | 17 | CH_ppe_365 | 6 | 38 | 0.000208965 |
Prunus persica | scaffold_6 | 17 | CH_ppe_268 | 4 | 4 | 0.00000602276 |
Ricinus communis | 29729 | 17 | CH_rco_68 | 7 | 19 | 0.00000000506892 |
Ricinus communis | 30025 | 17 | CH_rco_268 | 3 | 3 | 0.000862693 |
Solanum lycopersicum | ch02 | 17 | CH_sly_496 | 3 | 3 | 0.000987545 |
Solanum lycopersicum | ch04 | 17 | CH_sly_495 | 3 | 3 | 0.000987545 |
Vitis vinifera | chr6 | 17 | CH_vvi_403 | 4 | 9 | 0.000479109 |
Vitis vinifera | chr6 | 18 | CH_vvi_107 | 10 | 235 | 0.000295575 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |