Vitis vinifera

Vitis vinifera, the grapevine, has been used to produce wine for thousands of years. This was the fourth genome of a flowering plant produced, selected because of it's importance in food production. Also vitis lacks any recent genome doublings; it resembles a more ancestral state of the genome and revealed some major insights in the evolution of Angiosperms.
Publication:
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.
Info and Links
Common name | Vitis vinifera |
Cultivar/subspecies | Not available |
PLAZA identifier | vvi |
Source | Genoscope.12x |
NCBI taxonomy | 29760 |
Mitochondrion | Not available |
Chloroplast | Not available |
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Annotations
Page 1 of 1318, showing 20 records out of 26346 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
GSVIVG01000001001 | GSVIVT01000001001 | 2596280 | 2598768 | - | chr14 | coding | HOM05D004613 | ORTHO05D006095 |
GSVIVG01000002001 | GSVIVT01000002001 | 2600666 | 2606953 | - | chr14 | coding | HOM05D000735 | ORTHO05D000838 |
GSVIVG01000003001 | GSVIVT01000003001 | 2616641 | 2620113 | - | chr14 | coding | HOM05D006710 | ORTHO05D008353 |
GSVIVG01000004001 | GSVIVT01000004001 | 2638739 | 2641947 | + | chr14 | coding | HOM05D006416 | ORTHO05D008054 |
GSVIVG01000005001 | GSVIVT01000005001 | 2642655 | 2643125 | - | chr14 | coding | HOM05D000273 | ORTHO05D000198 |
GSVIVG01000006001 | GSVIVT01000006001 | 2643169 | 2644348 | - | chr14 | coding | HOM05D000273 | ORTHO05D000198 |
GSVIVG01000007001 | GSVIVT01000007001 | 2645435 | 2646987 | - | chr14 | coding | HOM05D000273 | ORTHO05D000198 |
GSVIVG01000008001 | GSVIVT01000008001 | 2650512 | 2654362 | - | chr14 | coding | HOM05D000108 | ORTHO05D006029 |
GSVIVG01000009001 | GSVIVT01000009001 | 2656385 | 2692593 | + | chr14 | coding | HOM05D002553 | ORTHO05D002767 |
GSVIVG01000010001 | GSVIVT01000010001 | 2692594 | 2693148 | + | chr14 | coding | Orphan Gene | Orphan Gene |
GSVIVG01000012001 | GSVIVT01000012001 | 2775566 | 2776726 | - | chr14 | coding | HOM05D000469 | ORTHO05D000323 |
GSVIVG01000015001 | GSVIVT01000015001 | 2814374 | 2816491 | + | chr14 | coding | HOM05D000157 | ORTHO05D000691 |
GSVIVG01000016001 | GSVIVT01000016001 | 2828973 | 2836623 | + | chr14 | coding | HOM05D006305 | ORTHO05D007984 |
GSVIVG01000017001 | GSVIVT01000017001 | 2840389 | 2843114 | - | chr14 | coding | HOM05D000085 | ORTHO05D003318 |
GSVIVG01000019001 | GSVIVT01000019001 | 2846314 | 2850241 | - | chr14 | coding | HOM05D004389 | ORTHO05D005457 |
GSVIVG01000020001 | GSVIVT01000020001 | 2857245 | 2863852 | + | chr14 | coding | HOM05D001407 | ORTHO05D001314 |
GSVIVG01000021001 | GSVIVT01000021001 | 2869829 | 2870678 | + | chr14 | coding | HOM05D000520 | ORTHO05D000399 |
GSVIVG01000023001 | GSVIVT01000023001 | 2879549 | 2883425 | - | chr14 | coding | Orphan Gene | Orphan Gene |
GSVIVG01000024001 | GSVIVT01000024001 | 2895056 | 2899865 | + | chr14 | coding | HOM05D002900 | ORTHO05D003238 |
GSVIVG01000025001 | GSVIVT01000025001 | 2902750 | 2909271 | + | chr14 | coding | HOM05D000665 | ORTHO05D000140 |