Functional clusters

Information

  • Type InterPro
  • Description Protein disulfide-isomerase SCO2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG02 5 CH_aco_215 2 2 0.000248839
Allium sativum chr8 5 CH_asa_1113 2 4 0.000232513
Aegilops tauschii 5D 5 CH_ata_582 2 4 0.000295436
Brachypodium distachyon Bd4 5 CH_bdi_630 2 6 0.000924898
Cenchrus purpureus GWHAORA00000002 5 CH_cpu_1395 2 2 0.000185483
Cenchrus purpureus GWHAORA00000010 5 CH_cpu_1396 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr02B 5 CH_dex_1219 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr02A 5 CH_dex_1220 2 2 0.000200521
Hordeum vulgare chr5H 5 CH_hvu_603 2 3 0.000121748
Lolium perenne Lp_chr5_0 5 CH_lpe_520 2 3 0.0000964258
Musa acuminata chr03 5 CH_mac_364 2 2 0.000340909
Miscanthus sinensis Chr04 5 CH_msi_862 2 2 0.000193193
Oryza alta GWHAZTO00000021 5 CH_oal_1347 2 2 0.000201513
Oryza sativa ssp. indica Chr9 5 CH_osaindica_477 2 2 0.0000516609
Oryza sativa Kitaake Chr9 5 CH_osak_604 2 2 0.0000562857
Oryza sativa ssp. japonica chr09 5 CH_osa_496 2 2 0.0000528123
Oropetium thomaeum Chromosome_2 5 CH_oth_247 2 2 0.0000711845
Phyllostachys edulis hic_scaffold_3 5 CH_ped_823 2 2 0.000407456
Panicum hallii Chr02 5 CH_pha_493 2 2 0.0000581108
Sorghum bicolor Chr02 5 CH_sbi_552 2 3 0.0000586682
Setaria italica scaffold_2 5 CH_sit_615 2 2 0.0000580434
Saccharum spontaneum Chr2D 5 CH_ssp_1724 2 2 0.000357884
Setaria viridis Chr_02 5 CH_svi_606 2 2 0.0000521785
Triticum aestivum Chr5D 5 CH_tae_2532 2 4 0.000673409
Triticum dicoccoides 5A 5 CH_tdi_1040 2 3 0.000267159
Triticum turgidum chr5A 5 CH_ttu_1301 2 3 0.000562541
Zea mays B73 2 5 CH_zma_338 2 2 0.0000511313
Ananas comosus LG02 6 CH_aco_215 2 2 0.000248839
Allium sativum chr8 6 CH_asa_1113 2 4 0.000232513
Aegilops tauschii 5D 6 CH_ata_582 2 4 0.000295436
Brachypodium distachyon Bd4 6 CH_bdi_630 2 6 0.000924898
Cenchrus purpureus GWHAORA00000002 6 CH_cpu_1395 2 2 0.000185483
Cenchrus purpureus GWHAORA00000010 6 CH_cpu_1396 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr02B 6 CH_dex_1219 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr02A 6 CH_dex_1220 2 2 0.000200521
Hordeum vulgare chr5H 6 CH_hvu_603 2 3 0.000121748
Lolium perenne Lp_chr5_0 6 CH_lpe_520 2 3 0.0000964258
Musa acuminata chr03 6 CH_mac_364 2 2 0.000340909
Miscanthus sinensis Chr04 6 CH_msi_862 2 2 0.000193193
Oryza alta GWHAZTO00000021 6 CH_oal_1347 2 2 0.000201513
Oryza sativa ssp. indica Chr9 6 CH_osaindica_477 2 2 0.0000516609
Oryza sativa Kitaake Chr9 6 CH_osak_604 2 2 0.0000562857
Oryza sativa ssp. japonica chr09 6 CH_osa_496 2 2 0.0000528123
Oropetium thomaeum Chromosome_2 6 CH_oth_247 2 2 0.0000711845
Phyllostachys edulis hic_scaffold_3 6 CH_ped_823 2 2 0.000407456
Panicum hallii Chr02 6 CH_pha_493 2 2 0.0000581108
Sorghum bicolor Chr02 6 CH_sbi_552 2 3 0.0000586682
Setaria italica scaffold_2 6 CH_sit_615 2 2 0.0000580434
Saccharum spontaneum Chr2D 6 CH_ssp_1724 2 2 0.000357884
Setaria viridis Chr_02 6 CH_svi_606 2 2 0.0000521785
Triticum aestivum Chr5D 6 CH_tae_2532 2 4 0.000673409
Triticum dicoccoides 5A 6 CH_tdi_1040 2 3 0.000267159
Triticum turgidum chr5A 6 CH_ttu_1301 2 3 0.000562541
Zea mays B73 2 6 CH_zma_338 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001