Functional clusters

Information

  • Type Gene Ontology
  • Description response to oxygen-containing compound

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eragrostis curvula 1 3 CH_ecu_772 16 67 0.000403686
Sequoiadendron giganteum chr1 3 CH_sgi_753 17 43 0.000001506
Spirodela polyrhiza pseudo17 3 CH_spo_88 21 56 0.00000207886
Triticum dicoccoides 7A 3 CH_tdi_540 10 22 0.000341987
Eragrostis curvula 1 4 CH_ecu_772 16 67 0.000403686
Sequoiadendron giganteum chr1 4 CH_sgi_753 17 43 0.000001506
Spirodela polyrhiza pseudo17 4 CH_spo_88 21 56 0.00000207886
Triticum dicoccoides 7A 4 CH_tdi_540 10 22 0.000341987

Available child term results

Ontology identifier Description Number of clusters
GO:0000302 response to reactive oxygen species 6
GO:0000303 response to superoxide 4
GO:0000304 response to singlet oxygen 8
GO:0006982 response to lipid hydroperoxide 2
GO:0009269 response to desiccation 10
GO:0009270 response to humidity 4
GO:0009414 response to water deprivation 4
GO:0009415 response to water 10
GO:0009737 response to abscisic acid 2
GO:0009739 response to gibberellin 2
GO:0009741 response to brassinosteroid 10
GO:0009742 brassinosteroid mediated signaling pathway 2
GO:0009743 response to carbohydrate 2
GO:0009745 sucrose mediated signaling 8
GO:0009747 hexokinase-dependent signaling 4
GO:0009750 response to fructose 2
GO:0009751 response to salicylic acid 10
GO:0009753 response to jasmonic acid 4
GO:0009787 regulation of abscisic acid-activated signaling pathway 20
GO:0009788 negative regulation of abscisic acid-activated signaling pathway 20
GO:0009819 drought recovery 66
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 4
GO:0009863 salicylic acid mediated signaling pathway 4
GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway 2
GO:0009937 regulation of gibberellic acid mediated signaling pathway 4
GO:0010037 response to carbon dioxide 8
GO:0010157 response to chlorate 4
GO:0010167 response to nitrate 6
GO:0010193 response to ozone 58
GO:0010200 response to chitin 26
GO:0010421 hydrogen peroxide-mediated programmed cell death 6
GO:0010555 response to mannitol 2
GO:0019430 removal of superoxide radicals 2
GO:0031001 response to brefeldin A 6
GO:0032497 detection of lipopolysaccharide 4
GO:0033194 response to hydroperoxide 4
GO:0033198 response to ATP 8
GO:0033591 response to L-ascorbic acid 2
GO:0034286 response to maltose 4
GO:0042542 response to hydrogen peroxide 8
GO:0042631 cellular response to water deprivation 14
GO:0043201 response to leucine 6
GO:0045471 response to ethanol 26
GO:0046898 response to cycloheximide 8
GO:0060416 response to growth hormone 8
GO:0071215 cellular response to abscisic acid stimulus 6
GO:0071230 cellular response to amino acid stimulus 2
GO:0071249 cellular response to nitrate 4
GO:0071323 cellular response to chitin 10
GO:0071332 cellular response to fructose stimulus 4
GO:0071370 cellular response to gibberellin stimulus 2
GO:0071395 cellular response to jasmonic acid stimulus 2
GO:0071398 cellular response to fatty acid 4
GO:0071446 cellular response to salicylic acid stimulus 2
GO:0071452 cellular response to singlet oxygen 4
GO:0071731 response to nitric oxide 4
GO:0071732 cellular response to nitric oxide 2
GO:0072708 response to sorbitol 2
GO:0097305 response to alcohol 6
GO:0097468 programmed cell death in response to reactive oxygen species 2
GO:0098755 maintenance of seed dormancy by absisic acid 4
GO:1900457 regulation of brassinosteroid mediated signaling pathway 8
GO:1900458 negative regulation of brassinosteroid mediated signaling pathway 2
GO:1900459 positive regulation of brassinosteroid mediated signaling pathway 2
GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement 6
GO:1902065 response to L-glutamate 4
GO:1902584 positive regulation of response to water deprivation 2
GO:1903842 response to arsenite ion 2
GO:1904975 response to bleomycin 2
GO:1905582 response to mannose 14
GO:1905957 regulation of cellular response to alcohol 2
GO:2000022 regulation of jasmonic acid mediated signaling pathway 8
GO:2000031 regulation of salicylic acid mediated signaling pathway 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001