Functional clusters
Information
- Type Gene Ontology
- Description response to ethanol
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr6 | 3 | CH_asa_150 | 4 | 4 | 0.00000000414732 |
| Aegilops tauschii | 4D | 3 | CH_ata_413 | 2 | 3 | 0.000886299 |
| Chara braunii | BFEA01000396 | 3 | CH_cbr_161 | 2 | 2 | 0.000431562 |
| Chlamydomonas reinhardtii | chromosome_7 | 3 | CH_cre_30 | 3 | 6 | 0.00000155186 |
| Musa acuminata | chr09 | 3 | CH_mac_284 | 2 | 2 | 0.000852273 |
| Marchantia polymorpha | scaffold_76 | 3 | CH_mpo_14 | 5 | 5 | 0.00000000000143657 |
| Oryza alta | GWHAZTO00000003 | 3 | CH_oal_305 | 3 | 8 | 0.00000190975 |
| Oryza sativa ssp. indica | Chr3 | 3 | CH_osaindica_374 | 2 | 2 | 0.000516609 |
| Oryza sativa Kitaake | Chr3 | 3 | CH_osak_161 | 3 | 3 | 0.0000000475225 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_133 | 3 | 3 | 0.0000000836762 |
| Physcomitrium patens | Chr08 | 3 | CH_ppa_62 | 4 | 21 | 0.00000560971 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_94 | 10 | 40 | 7.40535e-23 |
| Spirodela polyrhiza | pseudo10 | 3 | CH_spo_17 | 7 | 22 | 0.00000000000000495479 |
| Allium sativum | chr6 | 4 | CH_asa_150 | 4 | 4 | 0.00000000414732 |
| Aegilops tauschii | 4D | 4 | CH_ata_413 | 2 | 3 | 0.000886299 |
| Chara braunii | BFEA01000396 | 4 | CH_cbr_161 | 2 | 2 | 0.000431562 |
| Chlamydomonas reinhardtii | chromosome_7 | 4 | CH_cre_30 | 3 | 6 | 0.00000155186 |
| Musa acuminata | chr09 | 4 | CH_mac_284 | 2 | 2 | 0.000852273 |
| Marchantia polymorpha | scaffold_76 | 4 | CH_mpo_14 | 5 | 5 | 0.00000000000143657 |
| Oryza alta | GWHAZTO00000003 | 4 | CH_oal_305 | 3 | 8 | 0.00000190975 |
| Oryza sativa ssp. indica | Chr3 | 4 | CH_osaindica_374 | 2 | 2 | 0.000516609 |
| Oryza sativa Kitaake | Chr3 | 4 | CH_osak_161 | 3 | 3 | 0.0000000475225 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_133 | 3 | 3 | 0.0000000836762 |
| Physcomitrium patens | Chr08 | 4 | CH_ppa_62 | 4 | 21 | 0.00000560971 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_94 | 10 | 40 | 7.40535e-23 |
| Spirodela polyrhiza | pseudo10 | 4 | CH_spo_17 | 7 | 22 | 0.00000000000000495479 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |