Functional clusters
Information
- Type Gene Ontology
- Description response to chitin
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Calamus simplicifolius | scaffold721 | 3 | CH_calsi_133 | 5 | 11 | 0.0000106032 |
| Glycine max | Gm11 | 3 | CH_gma_351 | 4 | 4 | 0.0000805708 |
| Hordeum vulgare | chr3H | 3 | CH_hvu_136 | 6 | 12 | 0.0000000240967 |
| Lolium perenne | Lp_chr6_0 | 3 | CH_lpe_387 | 4 | 10 | 0.000407945 |
| Oryza sativa ssp. japonica | chr02 | 3 | CH_osa_129 | 6 | 11 | 0.0000000509633 |
| Secale cereale | GWHASIY00000003 | 3 | CH_sce_53 | 8 | 9 | 0.0000000000000349552 |
| Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_244 | 5 | 19 | 0.00000353855 |
| Triticum aestivum | Chr3D | 3 | CH_tae_161 | 8 | 9 | 0.000000000000011951 |
| Triticum aestivum | Chr3B | 3 | CH_tae_242 | 7 | 8 | 0.00000000000330156 |
| Triticum aestivum | Chr3A | 3 | CH_tae_790 | 5 | 9 | 0.00000493922 |
| Triticum dicoccoides | 3B | 3 | CH_tdi_463 | 4 | 7 | 0.000146589 |
| Triticum turgidum | chr3B | 3 | CH_ttu_141 | 7 | 12 | 0.000000000311528 |
| Triticum turgidum | chr3A | 3 | CH_ttu_608 | 4 | 7 | 0.000336429 |
| Calamus simplicifolius | scaffold721 | 4 | CH_calsi_133 | 5 | 11 | 0.0000106032 |
| Glycine max | Gm11 | 4 | CH_gma_351 | 4 | 4 | 0.0000805708 |
| Hordeum vulgare | chr3H | 4 | CH_hvu_136 | 6 | 12 | 0.0000000240967 |
| Lolium perenne | Lp_chr6_0 | 4 | CH_lpe_387 | 4 | 10 | 0.000407945 |
| Oryza sativa ssp. japonica | chr02 | 4 | CH_osa_129 | 6 | 11 | 0.0000000509633 |
| Secale cereale | GWHASIY00000003 | 4 | CH_sce_53 | 8 | 9 | 0.0000000000000349552 |
| Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_244 | 5 | 19 | 0.00000353855 |
| Triticum aestivum | Chr3D | 4 | CH_tae_161 | 8 | 9 | 0.000000000000011951 |
| Triticum aestivum | Chr3B | 4 | CH_tae_242 | 7 | 8 | 0.00000000000330156 |
| Triticum aestivum | Chr3A | 4 | CH_tae_790 | 5 | 9 | 0.00000493922 |
| Triticum dicoccoides | 3B | 4 | CH_tdi_463 | 4 | 7 | 0.000146589 |
| Triticum turgidum | chr3B | 4 | CH_ttu_141 | 7 | 12 | 0.000000000311528 |
| Triticum turgidum | chr3A | 4 | CH_ttu_608 | 4 | 7 | 0.000336429 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0071323 | cellular response to chitin | 10 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |