Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of transcription, DNA-templated

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 3D 3 CH_ata_277 5 8 0.000115132
Eragrostis curvula 3 3 CH_ecu_541 5 7 0.0000195172
Triticum dicoccoides 3B 3 CH_tdi_178 6 7 0.0000000876476
Triticum dicoccoides 3A 3 CH_tdi_370 5 7 0.000034726
Aegilops tauschii 3D 4 CH_ata_277 5 8 0.000115132
Eragrostis curvula 3 4 CH_ecu_541 5 7 0.0000195172
Triticum dicoccoides 3B 4 CH_tdi_178 6 7 0.0000000876476
Triticum dicoccoides 3A 4 CH_tdi_370 5 7 0.000034726

Available child term results

Ontology identifier Description Number of clusters
GO:0031936 negative regulation of chromatin silencing 2
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 12
GO:0045944 positive regulation of transcription by RNA polymerase II 14
GO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001