Functional clusters
Information
- Type Gene Ontology
- Description positive regulation of transcription elongation from RNA polymerase II promoter
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 3 | CH_aag_157 | 2 | 2 | 0.000481541 |
| Allium sativum | chr7_2 | 3 | CH_asa_283 | 3 | 3 | 0.00000102503 |
| Magnolia biondii | Chr19 | 3 | CH_mbi_55 | 5 | 6 | 0.0000000000000315452 |
| Phyllostachys edulis | hic_scaffold_5 | 3 | CH_ped_204 | 3 | 4 | 0.0000016434 |
| Vanilla planifolia | CM028154.1 | 3 | CH_vpl_32 | 4 | 4 | 0.000000000152497 |
| Vanilla planifolia | CM028150.1 | 3 | CH_vpl_91 | 4 | 19 | 0.000000589442 |
| Anthoceros agrestis | Sc2ySwM_228 | 4 | CH_aag_157 | 2 | 2 | 0.000481541 |
| Allium sativum | chr7_2 | 4 | CH_asa_283 | 3 | 3 | 0.00000102503 |
| Magnolia biondii | Chr19 | 4 | CH_mbi_55 | 5 | 6 | 0.0000000000000315452 |
| Phyllostachys edulis | hic_scaffold_5 | 4 | CH_ped_204 | 3 | 4 | 0.0000016434 |
| Vanilla planifolia | CM028154.1 | 4 | CH_vpl_32 | 4 | 4 | 0.000000000152497 |
| Vanilla planifolia | CM028150.1 | 4 | CH_vpl_91 | 4 | 19 | 0.000000589442 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |