Functional clusters

Information

  • Type Gene Ontology
  • Description cellular amide metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000009 3 CH_cpu_794 8 20 0.000304781
Saccharum spontaneum Chr3D 3 CH_ssp_192 8 9 0.0000000277764
Cenchrus purpureus GWHAORA00000009 4 CH_cpu_794 8 20 0.000304781
Saccharum spontaneum Chr3D 4 CH_ssp_192 8 9 0.0000000277764

Available child term results

Ontology identifier Description Number of clusters
GO:0000256 allantoin catabolic process 2
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 2
GO:0001731 formation of translation preinitiation complex 2
GO:0002182 cytoplasmic translational elongation 6
GO:0006104 succinyl-CoA metabolic process 4
GO:0006412 translation 8
GO:0006413 translational initiation 2
GO:0006415 translational termination 12
GO:0006417 regulation of translation 4
GO:0006418 tRNA aminoacylation for protein translation 6
GO:0006419 alanyl-tRNA aminoacylation 10
GO:0006420 arginyl-tRNA aminoacylation 4
GO:0006422 aspartyl-tRNA aminoacylation 32
GO:0006424 glutamyl-tRNA aminoacylation 8
GO:0006426 glycyl-tRNA aminoacylation 26
GO:0006427 histidyl-tRNA aminoacylation 2
GO:0006428 isoleucyl-tRNA aminoacylation 2
GO:0006429 leucyl-tRNA aminoacylation 20
GO:0006430 lysyl-tRNA aminoacylation 10
GO:0006431 methionyl-tRNA aminoacylation 8
GO:0006432 phenylalanyl-tRNA aminoacylation 4
GO:0006433 prolyl-tRNA aminoacylation 12
GO:0006434 seryl-tRNA aminoacylation 30
GO:0006435 threonyl-tRNA aminoacylation 10
GO:0006436 tryptophanyl-tRNA aminoacylation 8
GO:0006438 valyl-tRNA aminoacylation 28
GO:0006465 signal peptide processing 4
GO:0006680 glucosylceramide catabolic process 2
GO:0006749 glutathione metabolic process 218
GO:0032055 negative regulation of translation in response to stress 2
GO:0033355 ascorbate glutathione cycle 10
GO:0034248 regulation of cellular amide metabolic process 2
GO:0035278 miRNA mediated inhibition of translation 60
GO:0043419 urea catabolic process 6
GO:0045727 positive regulation of translation 6
GO:0045901 positive regulation of translational elongation 2
GO:0046514 ceramide catabolic process 4
GO:0046656 folic acid biosynthetic process 2
GO:0046938 phytochelatin biosynthetic process 10
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 2
GO:0061158 3'-UTR-mediated mRNA destabilization 2
GO:0070150 mitochondrial glycyl-tRNA aminoacylation 2
GO:0072344 rescue of stalled ribosome 16
GO:0097167 circadian regulation of translation 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 2
GO:1900706 positive regulation of siderophore biosynthetic process 26
GO:2001294 malonyl-CoA catabolic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001