Functional clusters
Information
- Type Gene Ontology
- Description positive regulation of siderophore biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 3D | 3 | CH_ata_363 | 2 | 3 | 0.000443157 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_537 | 2 | 2 | 0.000171895 |
| Glycine max | Gm03 | 3 | CH_gma_468 | 2 | 3 | 0.000341591 |
| Hordeum vulgare | chr3H | 3 | CH_hvu_138 | 3 | 5 | 0.0000000247049 |
| Lolium perenne | Lp_chr3_0 | 3 | CH_lpe_267 | 3 | 53 | 0.0000362748 |
| Populus trichocarpa | Chr06 | 3 | CH_ptr_395 | 2 | 2 | 0.0001734 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_203 | 5 | 5 | 0.00000000000000532293 |
| Triticum aestivum | Chr3A | 3 | CH_tae_261 | 4 | 4 | 0.0000000000140419 |
| Triticum aestivum | Chr3D | 3 | CH_tae_295 | 4 | 5 | 0.0000000000702041 |
| Triticum dicoccoides | 3A | 3 | CH_tdi_518 | 2 | 3 | 0.000267159 |
| Triticum turgidum | chr3B | 3 | CH_ttu_111 | 4 | 5 | 0.0000000000320534 |
| Triticum turgidum | chr3A | 3 | CH_ttu_239 | 3 | 3 | 0.0000000820505 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00034.1 | 3 | CH_zjn_159 | 2 | 2 | 0.000111029 |
| Aegilops tauschii | 3D | 4 | CH_ata_363 | 2 | 3 | 0.000443157 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_537 | 2 | 2 | 0.000171895 |
| Glycine max | Gm03 | 4 | CH_gma_468 | 2 | 3 | 0.000341591 |
| Hordeum vulgare | chr3H | 4 | CH_hvu_138 | 3 | 5 | 0.0000000247049 |
| Lolium perenne | Lp_chr3_0 | 4 | CH_lpe_267 | 3 | 53 | 0.0000362748 |
| Populus trichocarpa | Chr06 | 4 | CH_ptr_395 | 2 | 2 | 0.0001734 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_203 | 5 | 5 | 0.00000000000000532293 |
| Triticum aestivum | Chr3A | 4 | CH_tae_261 | 4 | 4 | 0.0000000000140419 |
| Triticum aestivum | Chr3D | 4 | CH_tae_295 | 4 | 5 | 0.0000000000702041 |
| Triticum dicoccoides | 3A | 4 | CH_tdi_518 | 2 | 3 | 0.000267159 |
| Triticum turgidum | chr3B | 4 | CH_ttu_111 | 4 | 5 | 0.0000000000320534 |
| Triticum turgidum | chr3A | 4 | CH_ttu_239 | 3 | 3 | 0.0000000820505 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00034.1 | 4 | CH_zjn_159 | 2 | 2 | 0.000111029 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |