Functional clusters

Information

  • Type Gene Ontology
  • Description miRNA mediated inhibition of translation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Ananas comosus LG20 3 CH_aco_81 2 2 0.0000829463
Aegilops tauschii 6D 3 CH_ata_241 2 2 0.0000492417
Arabidopsis thaliana Chr3 3 CH_ath_617 2 6 0.000429713
Brachypodium distachyon Bd3 3 CH_bdi_191 2 2 0.0000616675
Ceratophyllum demersum 8 3 CH_cde_144 2 2 0.000236939
Cenchrus purpureus GWHAORA00000011 3 CH_cpu_739 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr09B 3 CH_dex_660 2 3 0.000601541
Hordeum vulgare chr6H 3 CH_hvu_287 2 2 0.0000405836
Lolium perenne Lp_chr6_0 3 CH_lpe_255 2 2 0.0000321425
Oryza alta GWHAZTO00000014 3 CH_oal_653 2 4 0.000362712
Oryza brachyantha 2 3 CH_obr_196 2 2 0.0000597336
Oryza sativa ssp. indica Chr2 3 CH_osaindica_256 2 2 0.0000516609
Oryza sativa Kitaake Chr2 3 CH_osak_291 2 2 0.0000562857
Phyllostachys edulis hic_scaffold_3 3 CH_ped_389 2 2 0.000244474
Phyllostachys edulis hic_scaffold_17 3 CH_ped_390 2 2 0.000244474
Panicum hallii Chr09 3 CH_pha_391 2 5 0.000581058
Populus trichocarpa Chr12 3 CH_ptr_415 2 2 0.000346801
Populus trichocarpa Chr15 3 CH_ptr_416 2 2 0.000346801
Sorghum bicolor Chr01 3 CH_sbi_320 2 3 0.000176
Secale cereale GWHASIY00000006 3 CH_sce_444 3 40 0.0000306951
Setaria italica scaffold_9 3 CH_sit_335 2 3 0.000174125
Saccharum spontaneum Chr1C 3 CH_ssp_229 4 34 0.000000132078
Setaria viridis Chr_09 3 CH_svi_354 2 3 0.000156531
Triticum aestivum Chr6B 3 CH_tae_1209 2 2 0.000280599
Triticum aestivum Chr6A 3 CH_tae_1210 2 2 0.000280599
Triticum aestivum Chr6D 3 CH_tae_1211 2 2 0.000280599
Triticum dicoccoides 6B 3 CH_tdi_426 2 2 0.0000890551
Triticum turgidum chr6A 3 CH_ttu_542 2 2 0.000187521
Triticum turgidum chr6B 3 CH_ttu_543 2 2 0.000187521
Zea mays B73 9 3 CH_zma_235 2 2 0.000153394
Ananas comosus LG20 4 CH_aco_81 2 2 0.0000829463
Aegilops tauschii 6D 4 CH_ata_241 2 2 0.0000492417
Arabidopsis thaliana Chr3 4 CH_ath_617 2 6 0.000429713
Brachypodium distachyon Bd3 4 CH_bdi_191 2 2 0.0000616675
Ceratophyllum demersum 8 4 CH_cde_144 2 2 0.000236939
Cenchrus purpureus GWHAORA00000011 4 CH_cpu_739 2 2 0.000185483
Digitaria exilis Dexi_CM05836_chr09B 4 CH_dex_660 2 3 0.000601541
Hordeum vulgare chr6H 4 CH_hvu_287 2 2 0.0000405836
Lolium perenne Lp_chr6_0 4 CH_lpe_255 2 2 0.0000321425
Oryza alta GWHAZTO00000014 4 CH_oal_653 2 4 0.000362712
Oryza brachyantha 2 4 CH_obr_196 2 2 0.0000597336
Oryza sativa ssp. indica Chr2 4 CH_osaindica_256 2 2 0.0000516609
Oryza sativa Kitaake Chr2 4 CH_osak_291 2 2 0.0000562857
Phyllostachys edulis hic_scaffold_3 4 CH_ped_389 2 2 0.000244474
Phyllostachys edulis hic_scaffold_17 4 CH_ped_390 2 2 0.000244474
Panicum hallii Chr09 4 CH_pha_391 2 5 0.000581058
Populus trichocarpa Chr12 4 CH_ptr_415 2 2 0.000346801
Populus trichocarpa Chr15 4 CH_ptr_416 2 2 0.000346801
Sorghum bicolor Chr01 4 CH_sbi_320 2 3 0.000176
Secale cereale GWHASIY00000006 4 CH_sce_444 3 40 0.0000306951
Setaria italica scaffold_9 4 CH_sit_335 2 3 0.000174125
Saccharum spontaneum Chr1C 4 CH_ssp_229 4 34 0.000000132078
Setaria viridis Chr_09 4 CH_svi_354 2 3 0.000156531
Triticum aestivum Chr6B 4 CH_tae_1209 2 2 0.000280599
Triticum aestivum Chr6A 4 CH_tae_1210 2 2 0.000280599
Triticum aestivum Chr6D 4 CH_tae_1211 2 2 0.000280599
Triticum dicoccoides 6B 4 CH_tdi_426 2 2 0.0000890551
Triticum turgidum chr6A 4 CH_ttu_542 2 2 0.000187521
Triticum turgidum chr6B 4 CH_ttu_543 2 2 0.000187521
Zea mays B73 9 4 CH_zma_235 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001