Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of cellular protein metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Oryza brachyantha 5 3 CH_obr_148 5 6 0.0000092315
Oryza brachyantha 5 3 CH_obr_313 4 5 0.000903925
Oryza brachyantha 5 4 CH_obr_148 5 6 0.0000092315
Oryza brachyantha 5 4 CH_obr_313 4 5 0.000903925

Available child term results

Ontology identifier Description Number of clusters
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 20
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 2
GO:0006417 regulation of translation 4
GO:0010466 negative regulation of peptidase activity 10
GO:0010951 negative regulation of endopeptidase activity 6
GO:0031063 regulation of histone deacetylation 4
GO:0032055 negative regulation of translation in response to stress 2
GO:0032147 activation of protein kinase activity 4
GO:0033234 negative regulation of protein sumoylation 2
GO:0035278 miRNA mediated inhibition of translation 60
GO:0043407 negative regulation of MAP kinase activity 4
GO:0043666 regulation of phosphoprotein phosphatase activity 2
GO:0045727 positive regulation of translation 6
GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity 2
GO:0045901 positive regulation of translational elongation 2
GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation 2
GO:0051571 positive regulation of histone H3-K4 methylation 4
GO:0051573 negative regulation of histone H3-K9 methylation 6
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 2
GO:0061158 3'-UTR-mediated mRNA destabilization 2
GO:0072344 rescue of stalled ribosome 16
GO:0080163 regulation of protein serine/threonine phosphatase activity 4
GO:0097167 circadian regulation of translation 2
GO:1900109 regulation of histone H3-K9 dimethylation 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain 2
GO:1901799 negative regulation of proteasomal protein catabolic process 6
GO:1902466 positive regulation of histone H3-K27 trimethylation 2
GO:1902916 positive regulation of protein polyubiquitination 2
GO:1904292 regulation of ERAD pathway 4
GO:1904294 positive regulation of ERAD pathway 8
GO:1904667 negative regulation of ubiquitin protein ligase activity 2
GO:1904668 positive regulation of ubiquitin protein ligase activity 14
GO:2000117 negative regulation of cysteine-type endopeptidase activity 16
GO:2000541 positive regulation of protein geranylgeranylation 4
GO:2001253 regulation of histone H3-K36 trimethylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001