Functional clusters

Information

  • Type Gene Ontology
  • Description positive regulation of ubiquitin protein ligase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_368 3 CH_aag_188 2 2 0.000802568
Calamus simplicifolius scaffold508 3 CH_calsi_250 3 12 0.000326434
Elaeis guineensis EG5.1_Chr11 3 CH_egu_70 3 3 0.000000753878
Musa acuminata chrUn_random 3 CH_mac_161 3 6 0.000110282
Oryza brachyantha 2 3 CH_obr_298 2 2 0.000597336
Sorghum bicolor Chr06 3 CH_sbi_450 2 2 0.000880023
Vanilla planifolia CM028156.1 3 CH_vpl_12 7 24 5.31291e-16
Anthoceros agrestis Sc2ySwM_368 4 CH_aag_188 2 2 0.000802568
Calamus simplicifolius scaffold508 4 CH_calsi_250 3 12 0.000326434
Elaeis guineensis EG5.1_Chr11 4 CH_egu_70 3 3 0.000000753878
Musa acuminata chrUn_random 4 CH_mac_161 3 6 0.000110282
Oryza brachyantha 2 4 CH_obr_298 2 2 0.000597336
Sorghum bicolor Chr06 4 CH_sbi_450 2 2 0.000880023
Vanilla planifolia CM028156.1 4 CH_vpl_12 7 24 5.31291e-16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001