Functional clusters

Information

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Sequoiadendron giganteum	chr10	3	CH_sgi_1233	4	4	0.0003536
Sequoiadendron giganteum	chr10	4	CH_sgi_1233	4	4	0.0003536

Ontology identifier	Description	Number of clusters
GO:0006887	exocytosis	10
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	2
GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	6
GO:0006891	intra-Golgi vesicle-mediated transport	4
GO:0006893	Golgi to plasma membrane transport	12
GO:0006904	vesicle docking involved in exocytosis	6
GO:0006907	pinocytosis	2
GO:0016197	endosomal transport	2
GO:0017157	regulation of exocytosis	6
GO:0032456	endocytic recycling	4
GO:0035494	SNARE complex disassembly	14
GO:0043001	Golgi to plasma membrane protein transport	2
GO:0043328	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	4
GO:0045056	transcytosis	2
GO:0048193	Golgi vesicle transport	2
GO:0048208	COPII vesicle coating	30
GO:0048227	plasma membrane to endosome transport	8
GO:0048280	vesicle fusion with Golgi apparatus	6
GO:0060628	regulation of ER to Golgi vesicle-mediated transport	4
GO:0090114	COPII-coated vesicle budding	2
GO:0090522	vesicle tethering involved in exocytosis	12
GO:0099022	vesicle tethering	4
GO:1900186	negative regulation of clathrin-dependent endocytosis	6
GO:2000369	regulation of clathrin-dependent endocytosis	2
GO:2000641	regulation of early endosome to late endosome transport	16

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value
1	MapMan	No filter applied.	2	30	80	0.001
2	MapMan	No filter applied.	2	30	80	0.001
3	GO	All GO data.	2	30	80	0.001
4	GO	All GO data.	2	30	80	0.001
5	InterPro	No filter applied.	2	30	80	0.001
6	InterPro	No filter applied.	2	30	80	0.001