Functional clusters
Information
- Type Gene Ontology
- Description COPII vesicle coating
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Allium sativum | chr5 | 3 | CH_asa_650 | 2 | 2 | 0.000232522 |
Arabidopsis thaliana | Chr5 | 3 | CH_ath_402 | 2 | 2 | 0.0000286492 |
Glycine max | Gm11 | 3 | CH_gma_445 | 2 | 2 | 0.000227734 |
Glycine max | Gm01 | 3 | CH_gma_446 | 2 | 2 | 0.000227734 |
Physcomitrium patens | Chr04 | 3 | CH_ppa_145 | 2 | 2 | 0.000183818 |
Sorghum bicolor | Chr04 | 3 | CH_sbi_340 | 2 | 2 | 0.000176005 |
Secale cereale | GWHASIY00000007 | 3 | CH_sce_678 | 2 | 3 | 0.000409746 |
Sequoiadendron giganteum | chr2 | 3 | CH_sgi_1143 | 2 | 2 | 0.000146145 |
Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_398 | 2 | 3 | 0.000176077 |
Selaginella moellendorffii | scaffold_17 | 3 | CH_smo_13 | 8 | 25 | 0.000000000000089157 |
Selaginella moellendorffii | scaffold_27 | 3 | CH_smo_2 | 15 | 40 | 9.41527e-31 |
Saccharum spontaneum | Chr4D | 3 | CH_ssp_278 | 3 | 5 | 0.000000478121 |
Triticum dicoccoides | 4A | 3 | CH_tdi_646 | 2 | 3 | 0.000890512 |
Vanilla planifolia | CM028151.1 | 3 | CH_vpl_76 | 4 | 39 | 0.0000000994192 |
Zostera marina | Chr01 | 3 | CH_zosmarina_181 | 2 | 3 | 0.00086895 |
Allium sativum | chr5 | 4 | CH_asa_650 | 2 | 2 | 0.000232522 |
Arabidopsis thaliana | Chr5 | 4 | CH_ath_402 | 2 | 2 | 0.0000286492 |
Glycine max | Gm11 | 4 | CH_gma_445 | 2 | 2 | 0.000227734 |
Glycine max | Gm01 | 4 | CH_gma_446 | 2 | 2 | 0.000227734 |
Physcomitrium patens | Chr04 | 4 | CH_ppa_145 | 2 | 2 | 0.000183818 |
Sorghum bicolor | Chr04 | 4 | CH_sbi_340 | 2 | 2 | 0.000176005 |
Secale cereale | GWHASIY00000007 | 4 | CH_sce_678 | 2 | 3 | 0.000409746 |
Sequoiadendron giganteum | chr2 | 4 | CH_sgi_1143 | 2 | 2 | 0.000146145 |
Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_398 | 2 | 3 | 0.000176077 |
Selaginella moellendorffii | scaffold_17 | 4 | CH_smo_13 | 8 | 25 | 0.000000000000089157 |
Selaginella moellendorffii | scaffold_27 | 4 | CH_smo_2 | 15 | 40 | 9.41527e-31 |
Saccharum spontaneum | Chr4D | 4 | CH_ssp_278 | 3 | 5 | 0.000000478121 |
Triticum dicoccoides | 4A | 4 | CH_tdi_646 | 2 | 3 | 0.000890512 |
Vanilla planifolia | CM028151.1 | 4 | CH_vpl_76 | 4 | 39 | 0.0000000994192 |
Zostera marina | Chr01 | 4 | CH_zosmarina_181 | 2 | 3 | 0.00086895 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |