Functional clusters

Information

  • Type Gene Ontology
  • Description COPII vesicle coating

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr5 3 CH_asa_650 2 2 0.000232522
Arabidopsis thaliana Chr5 3 CH_ath_402 2 2 0.0000286492
Glycine max Gm11 3 CH_gma_445 2 2 0.000227734
Glycine max Gm01 3 CH_gma_446 2 2 0.000227734
Physcomitrium patens Chr04 3 CH_ppa_145 2 2 0.000183818
Sorghum bicolor Chr04 3 CH_sbi_340 2 2 0.000176005
Secale cereale GWHASIY00000007 3 CH_sce_678 2 3 0.000409746
Sequoiadendron giganteum chr2 3 CH_sgi_1143 2 2 0.000146145
Solanum lycopersicum SL4.0ch08 3 CH_sly_398 2 3 0.000176077
Selaginella moellendorffii scaffold_17 3 CH_smo_13 8 25 0.000000000000089157
Selaginella moellendorffii scaffold_27 3 CH_smo_2 15 40 9.41527e-31
Saccharum spontaneum Chr4D 3 CH_ssp_278 3 5 0.000000478121
Triticum dicoccoides 4A 3 CH_tdi_646 2 3 0.000890512
Vanilla planifolia CM028151.1 3 CH_vpl_76 4 39 0.0000000994192
Zostera marina Chr01 3 CH_zosmarina_181 2 3 0.00086895
Allium sativum chr5 4 CH_asa_650 2 2 0.000232522
Arabidopsis thaliana Chr5 4 CH_ath_402 2 2 0.0000286492
Glycine max Gm11 4 CH_gma_445 2 2 0.000227734
Glycine max Gm01 4 CH_gma_446 2 2 0.000227734
Physcomitrium patens Chr04 4 CH_ppa_145 2 2 0.000183818
Sorghum bicolor Chr04 4 CH_sbi_340 2 2 0.000176005
Secale cereale GWHASIY00000007 4 CH_sce_678 2 3 0.000409746
Sequoiadendron giganteum chr2 4 CH_sgi_1143 2 2 0.000146145
Solanum lycopersicum SL4.0ch08 4 CH_sly_398 2 3 0.000176077
Selaginella moellendorffii scaffold_17 4 CH_smo_13 8 25 0.000000000000089157
Selaginella moellendorffii scaffold_27 4 CH_smo_2 15 40 9.41527e-31
Saccharum spontaneum Chr4D 4 CH_ssp_278 3 5 0.000000478121
Triticum dicoccoides 4A 4 CH_tdi_646 2 3 0.000890512
Vanilla planifolia CM028151.1 4 CH_vpl_76 4 39 0.0000000994192
Zostera marina Chr01 4 CH_zosmarina_181 2 3 0.00086895

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001