Functional clusters
Information
- Type Gene Ontology
- Description retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_1069 | 3 | 10 | 0.000121997 |
| Saccharum spontaneum | Chr5D | 3 | CH_ssp_675 | 4 | 17 | 0.000123293 |
| Setaria viridis | Chr_07 | 3 | CH_svi_396 | 3 | 6 | 0.00029798 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_1069 | 3 | 10 | 0.000121997 |
| Saccharum spontaneum | Chr5D | 4 | CH_ssp_675 | 4 | 17 | 0.000123293 |
| Setaria viridis | Chr_07 | 4 | CH_svi_396 | 3 | 6 | 0.00029798 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |