Functional clusters
Information
- Type Gene Ontology
- Description diterpenoid metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Oropetium thomaeum | Chromosome_1 | 3 | CH_oth_115 | 2 | 2 | 0.0000711845 |
Setaria italica | scaffold_2 | 3 | CH_sit_288 | 2 | 2 | 0.0000580434 |
Oropetium thomaeum | Chromosome_1 | 4 | CH_oth_115 | 2 | 2 | 0.0000711845 |
Setaria italica | scaffold_2 | 4 | CH_sit_288 | 2 | 2 | 0.0000580434 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0009685 | gibberellin metabolic process | 12 |
GO:0009686 | gibberellin biosynthetic process | 8 |
GO:0010371 | regulation of gibberellin biosynthetic process | 8 |
GO:0010373 | negative regulation of gibberellin biosynthetic process | 2 |
GO:0016102 | diterpenoid biosynthetic process | 44 |
GO:0033306 | phytol metabolic process | 38 |
GO:0045487 | gibberellin catabolic process | 2 |
GO:1904964 | positive regulation of phytol biosynthetic process | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |