Functional clusters
Information
- Type Gene Ontology
- Description response to wounding
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000006 | 3 | CH_cpu_81 | 11 | 16 | 0.0000000000000216416 |
| Cenchrus purpureus | GWHAORA00000005 | 3 | CH_cpu_812 | 10 | 78 | 0.000366673 |
| Eragrostis curvula | 5 | 3 | CH_ecu_705 | 5 | 9 | 0.000226389 |
| Marchantia polymorpha | scaffold_36 | 3 | CH_mpo_51 | 6 | 9 | 0.00000207127 |
| Panicum hallii | Chr03 | 3 | CH_pha_336 | 7 | 28 | 0.000271126 |
| Setaria italica | scaffold_9 | 3 | CH_sit_171 | 7 | 12 | 0.000000248084 |
| Setaria viridis | Chr_09 | 3 | CH_svi_195 | 7 | 15 | 0.00000100218 |
| Triticum aestivum | Chr6B | 3 | CH_tae_1450 | 4 | 4 | 0.000985198 |
| Triticum aestivum | Chr1A | 3 | CH_tae_531 | 8 | 16 | 0.000000107345 |
| Cenchrus purpureus | GWHAORA00000006 | 4 | CH_cpu_81 | 11 | 16 | 0.0000000000000216416 |
| Cenchrus purpureus | GWHAORA00000005 | 4 | CH_cpu_812 | 10 | 78 | 0.000366673 |
| Eragrostis curvula | 5 | 4 | CH_ecu_705 | 5 | 9 | 0.000226389 |
| Marchantia polymorpha | scaffold_36 | 4 | CH_mpo_51 | 6 | 9 | 0.00000207127 |
| Panicum hallii | Chr03 | 4 | CH_pha_336 | 7 | 28 | 0.000271126 |
| Setaria italica | scaffold_9 | 4 | CH_sit_171 | 7 | 12 | 0.000000248084 |
| Setaria viridis | Chr_09 | 4 | CH_svi_195 | 7 | 15 | 0.00000100218 |
| Triticum aestivum | Chr6B | 4 | CH_tae_1450 | 4 | 4 | 0.000985198 |
| Triticum aestivum | Chr1A | 4 | CH_tae_531 | 8 | 16 | 0.000000107345 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0001778 | plasma membrane repair | 20 |
| GO:0009861 | jasmonic acid and ethylene-dependent systemic resistance | 6 |
| GO:0009868 | jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway | 2 |
| GO:0009871 | jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | 18 |
| GO:1903034 | regulation of response to wounding | 10 |
| GO:1990110 | callus formation | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |